RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 VAT1LQ9HCJ6 419 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 CXXC1Q9P0U4 656 aaPredicted RBP9.91□□□□□ -0.82
SNX27-201ENST00000368838 REV3LO60673 3130 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 CHD9Q3L8U1 2897 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 OPLAHO14841 1288 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 EDIL3O43854 480 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 B4GALT4O60513 344 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 KINO60870 393 aaKnown RBP9.9□□□□□ -0.82
SNX27-201ENST00000368838 NR1I2O75469 434 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 CD4P01730 458 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 MYL1P05976 194 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 MYL3P08590 195 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 CLCN1P35523 988 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 PPIGQ13427 754 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNX27-201ENST00000368838 ITGA7Q13683 1181 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
SNX27-201ENST00000368838 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 CT47A1Q5JQC4 288 aaPredicted RBP9.9□□□□□ -0.82
SNX27-201ENST00000368838 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 OTOP2Q7RTS6 562 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 MCF2L2Q86YR7 1114 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 TMEM199Q8N511 208 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 FSIP1Q8NA03 581 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 CLEC4DQ8WXI8 215 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 COPS5Q92905 334 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 SCLYQ96I15 445 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 MTMR9Q96QG7 549 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 PBX4Q9BYU1 374 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 HIPK3Q9H422 1215 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 PRDM12Q9H4Q4 367 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 ZNF576Q9H609 170 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 PRDM6Q9NQX0 595 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 TUBE1Q9UJT0 475 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 KAT6AQ92794 2004 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 FRMPD4Q14CM0 1322 aa9.9□□□□□ -0.82
SNX27-201ENST00000368838 PRRC2BQ5JSZ5 2229 aaKnown RBP9.89□□□□□ -0.83
SNX27-201ENST00000368838 GOLGA6L3A6NEY3 463 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 MAP3K7O43318 606 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 ZNF202O95125 648 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 CYP2C9P11712 490 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 PFKFB1P16118 471 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 HSD17B4P51659 736 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 FOSBP53539 338 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 RABGGTBP53611 331 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 CEBPZQ03701 1054 aaKnown RBP9.89□□□□□ -0.83
SNX27-201ENST00000368838 Q4G0T1 1027 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 FAM47CQ5HY64 1035 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 IQSEC1Q6DN90 963 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 XRRA1Q6P2D8 792 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 RNF207Q6ZRF8 634 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 SPATA20Q8TB22 786 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 TBCKQ8TEA7 893 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 WNT8AQ9H1J5 351 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 CUEDC2Q9H467 287 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 TRMT13Q9NUP7 481 aaKnown RBP9.89□□□□□ -0.83
SNX27-201ENST00000368838 HOOK1Q9UJC3 728 aaKnown RBP9.89□□□□□ -0.83
SNX27-201ENST00000368838 KCNH3Q9ULD8 1083 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 TTC28Q96AY4 2481 aa9.89□□□□□ -0.83
SNX27-201ENST00000368838 SPTBN5Q9NRC6 3674 aaKnown RBP9.89□□□□□ -0.83
SNX27-201ENST00000368838 FAM205CA6NFA0 338 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 ADAMTS3O15072 1205 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 OR52Z1P0C646 297 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 CCDC192P0DO97 292 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 MYOGP15173 224 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 MARCKSP29966 332 aaPredicted RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 SYKP43405 635 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 NDUFA8P51970 172 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 RPS6P62753 249 aaKnown RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 NKX3-2P78367 333 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 CCDC85BQ15834 202 aaPredicted RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 INF2Q27J81 1249 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 DTHD1Q6ZMT9 781 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 NIPA1Q7RTP0 329 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 TRIML1Q8N9V2 468 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 SLC43A3Q8NBI5 491 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 OR6J1Q8NGC5 347 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 TBC1D5Q92609 795 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 FAM20AQ96MK3 541 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 NOC4LQ9BVI4 516 aaKnown RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 ANO3Q9BYT9 981 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 GTPBP4Q9BZE4 634 aaKnown RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 RAB34Q9BZG1 259 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 TNMDQ9H2S6 317 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 NKX2-4Q9H2Z4 354 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 GOLPH3LQ9H4A5 285 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 EHMT1Q9H9B1 1298 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 VTA1Q9NP79 307 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 IL23AQ9NPF7 189 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 ADD3Q9UEY8 706 aaKnown RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 CHD7Q9P2D1 2997 aa9.88□□□□□ -0.83
SNX27-201ENST00000368838 COL4A4P53420 1690 aaPredicted RBP9.88□□□□□ -0.83
SNX27-201ENST00000368838 LOC102724159A0A0B4J2E5 919 aa9.87□□□□□ -0.83
SNX27-201ENST00000368838 SYCE3A1L190 88 aa9.87□□□□□ -0.83
SNX27-201ENST00000368838 SPDYE3A6NKU9 549 aa9.87□□□□□ -0.83
SNX27-201ENST00000368838 ZBBXA8MT70 800 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms