RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PSMD10O75832 226 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 DEFB103AP81534 67 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 B3GNT9Q6UX72 402 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 HERC6Q8IVU3 1022 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 ATP8B4Q8TF62 1192 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 DNAJB3Q8WWF6 145 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 MYLIPQ8WY64 445 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 TNPO1Q92973 898 aaKnown RBP21.45■■□□□ 1.02
CKS1B-203ENST00000368439 TNFRSF25Q93038 417 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 PCDHA2Q9Y5H9 948 aa21.45■■□□□ 1.02
CKS1B-203ENST00000368439 ZBTB42B2RXF5 422 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 HBP1O60381 514 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 IKBKEQ14164 716 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 PDXDC2PQ6P474 469 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 ETNPPLQ8TBG4 499 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 UNC45AQ9H3U1 944 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 IGSF9BQ9UPX0 1349 aa21.44■■□□□ 1.02
CKS1B-203ENST00000368439 CCDC194A0A1B0GVG4 234 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 SLC37A4O43826 429 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 PSAPP07602 524 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 KCNJ6P48051 423 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 LRCH2Q5VUJ6 765 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 MTHFD1LQ6UB35 978 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 TMCO2Q7Z6W1 182 aaPredicted RBP21.43■■□□□ 1.02
CKS1B-203ENST00000368439 TEKT3Q9BXF9 490 aa21.43■■□□□ 1.02
CKS1B-203ENST00000368439 FAM205CA6NFA0 338 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 WDR64B1ANS9 1081 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 GAS7O60861 476 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 EFCAB14O75071 495 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 ARHGEF15O94989 841 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 COL1A2P08123 1366 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 NR5A1Q13285 461 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 LETM2Q2VYF4 491 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 PPP4R3AQ6IN85 833 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.42■■□□□ 1.02
CKS1B-203ENST00000368439 PIK3AP1Q6ZUJ8 805 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 NEK8Q86SG6 692 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 SLC28A3Q9HAS3 691 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 DISC1Q9NRI5 854 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 GABBR1Q9UBS5 961 aa21.42■■□□□ 1.02
CKS1B-203ENST00000368439 DDX25Q9UHL0 483 aaKnown RBP21.42■■□□□ 1.02
CKS1B-203ENST00000368439 SMIM35A0A1B0GVV1 85 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 ZNF862O60290 1169 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 MMP1P03956 469 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 CA3P07451 260 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 KLRC1P26715 233 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 MRPS6P82932 125 aaKnown RBP21.41■■□□□ 1.02
CKS1B-203ENST00000368439 LPIN1Q14693 890 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 ZNF484Q5JVG2 852 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 RSPH3Q86UC2 560 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 CCDC83Q8IWF9 413 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 BBXQ8WY36 941 aaPredicted RBP21.41■■□□□ 1.02
CKS1B-203ENST00000368439 SEPT8Q92599 483 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 KCNMB3Q9NPA1 279 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 TCEAL9Q9UHQ7 104 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 CDY2AQ9Y6F7 541 aa21.41■■□□□ 1.02
CKS1B-203ENST00000368439 SFNP31947 248 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 KRT2P35908 639 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 JAK3P52333 1124 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 UGCGQ16739 394 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 FBXO47Q5MNV8 452 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 KRT40Q6A162 431 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
CKS1B-203ENST00000368439 FAM49AQ9H0Q0 323 aaPredicted RBP21.4■■□□□ 1.02
CKS1B-203ENST00000368439 SAMM50Q9Y512 469 aa21.4■■□□□ 1.02
CKS1B-203ENST00000368439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.39■■□□□ 1.01
CKS1B-203ENST00000368439 CHMP2AO43633 222 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 GJB5O95377 273 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 C22orf31O95567 290 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 RPLP2P05387 115 aaKnown RBP21.39■■□□□ 1.01
CKS1B-203ENST00000368439 GHRP10912 638 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 GCFC2P16383 781 aaKnown RBP21.39■■□□□ 1.01
CKS1B-203ENST00000368439 PPP2R2DQ66LE6 453 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 RDM1Q8NG50 284 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 LLPHQ9BRT6 129 aaKnown RBP21.39■■□□□ 1.01
CKS1B-203ENST00000368439 IFIH1Q9BYX4 1025 aaKnown RBP21.39■■□□□ 1.01
CKS1B-203ENST00000368439 PRDM12Q9H4Q4 367 aa21.39■■□□□ 1.01
CKS1B-203ENST00000368439 LCHNA4D1U4 455 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 BTBD18B2RXH4 712 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 FOSL2P15408 326 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 TMEM62Q0P6H9 643 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 IER5Q5VY09 327 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 CKAP2LQ8IYA6 745 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 DIS3L2Q8IYB7 885 aaKnown RBP21.38■■□□□ 1.01
CKS1B-203ENST00000368439 KIAA0319LQ8IZA0 1049 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 NME8Q8N427 588 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 HAS1Q92839 578 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 APBB2Q92870 758 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 VAV3Q9UKW4 847 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 TRANK1O15050 2925 aa21.38■■□□□ 1.01
CKS1B-203ENST00000368439 KDM3AQ9Y4C1 1321 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 KIF28PB7ZC32 967 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 TLL1O43897 1013 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 CCNT1O60563 726 aaKnown RBP21.37■■□□□ 1.01
CKS1B-203ENST00000368439 STBD1O95210 358 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 FOSBP53539 338 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 TAP1Q03518 808 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 ADGRE1Q14246 886 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 RABEP1Q15276 862 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 MIER3Q7Z3K6 550 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms