RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 HIBADHP31937 336 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 ECI1P42126 302 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 PPP2R2AP63151 447 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 MRPS21P82921 87 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 CYP4F3Q08477 520 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 RNF151Q2KHN1 245 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 TRIM48Q8IWZ4 208 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 TTLL11Q8NHH1 800 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 RNPC3Q96LT9 517 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 AARSD1Q9BTE6 412 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 PLA2G12BQ9BX93 195 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 C12orf65Q9H3J6 166 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 TRAV20A0A0B4J274 112 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 TLDC2A0PJX2 215 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 KRIT1O00522 736 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 TBX1O43435 398 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 GRIN1Q05586 938 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 CYP4F22Q6NT55 531 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 ULK2Q8IYT8 1036 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 KCTD13Q8WZ19 329 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 CDC6Q99741 560 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 ZNF703Q9H7S9 590 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 TLR9Q9NR96 1032 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 KDM2BQ8NHM5 1336 aa5.15□□□□□ -1.59
ECHDC1-201ENST00000368287 ARNTLO00327 626 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 PRODHO43272 600 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 SCG5P05408 212 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 KRT4P19013 534 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 RPS19P39019 145 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 RRADP55042 308 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 COL10A1Q03692 680 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 ZMAT1Q5H9K5 638 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 ZC3H12BQ5HYM0 836 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 NSMFQ6X4W1 530 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 IER2Q9BTL4 223 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 SLC2A4RGQ9NR83 387 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 NR2E1Q9Y466 385 aa5.14□□□□□ -1.59
ECHDC1-201ENST00000368287 TMEM191CA6NGB0 347 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 SLC27A2O14975 620 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 FOXN1O15353 648 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 ADCY3O60266 1144 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 FAM153BP0C7A2 387 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 FGFR1P11362 822 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 PABPC1P11940 636 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 MSX2P35548 267 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 GFRA1P56159 465 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 FSTL1Q12841 308 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 MAP4K2Q12851 820 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 DUSP8Q13202 625 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 SQSTM1Q13501 440 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 NOLC1Q14978 699 aaKnown RBP eCLIP5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 LONRF2Q1L5Z9 754 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 FAM177A1Q8N128 213 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 SH3TC2Q8TF17 1288 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 PARPBPQ9NWS1 579 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 CEP72Q9P209 647 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 CADPSQ9ULU8 1353 aa5.13□□□□□ -1.59
ECHDC1-201ENST00000368287 CUTAO60888 179 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 ENO2P09104 434 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 LCP1P13796 627 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 POLD1P28340 1107 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 LTBRP36941 435 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 GRIA2P42262 883 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 PFKPQ01813 784 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 HHEXQ03014 270 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 FOXL1Q12952 345 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 SF1Q15637 639 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 ACBD5Q5T8D3 534 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 SDE2Q6IQ49 451 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 Q6ZPA2 131 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 PPIL6Q8IXY8 311 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 TMEM145Q8NBT3 493 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 TACO1Q9BSH4 297 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 ARHGEF4Q9NR80 690 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 GIT1Q9Y2X7 761 aa5.12□□□□□ -1.59
ECHDC1-201ENST00000368287 ESYT3A0FGR9 886 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 CAPNS1P04632 268 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 FAHP16930 419 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 PAN2Q504Q3 1202 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 LAIR1Q6GTX8 287 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 ZNF662Q6ZS27 426 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 SGMS1Q86VZ5 419 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 JMYQ8N9B5 988 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 THAP3Q8WTV1 239 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 CLEC4DQ8WXI8 215 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 SLC6A20Q9NP91 592 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 PUF60Q9UHX1 559 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 TMA7Q9Y2S6 64 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 PTCH2Q9Y6C5 1203 aa5.11□□□□□ -1.59
ECHDC1-201ENST00000368287 TRBV23-1A0A0A0MS06 115 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 CCDC163A0A0D9SF12 145 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 KRTAP29-1A8MX34 341 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 MATN2O00339 956 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 DLX3O60479 287 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 IL18BPO95998 194 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms