RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ECE2O60344 883 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 HEXIM1O94992 359 aaKnown RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 ARHGAP4P98171 946 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 ITIH3Q06033 890 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 RC3H1Q5TC82 1133 aaKnown RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 METTL16Q86W50 562 aaKnown RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 RSAD2Q8WXG1 361 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 MAGOHBQ96A72 148 aaKnown RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 KLHL14Q9P2G3 628 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 COL3A1P02461 1466 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 HGSO14964 777 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 NTSR2O95665 410 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 SATB2Q9UPW6 733 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 F5H6K3 240 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 PGRMC1O00264 195 aaKnown RBP14.34□□□□□ -0.11
PTPRK-204ENST00000368210 KLRC3Q07444 240 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 C10orf76Q5T2E6 689 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 PIGOQ8TEQ8 1089 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 ZNF653Q96CK0 615 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 EPB41L4AQ9HCS5 686 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-204ENST00000368210 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 STAM2O75886 525 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 PSMD7P51665 324 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 PROM2Q8N271 834 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 RAD54LQ92698 747 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 E9PMD0 336 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 FDPSP14324 419 aaKnown RBP14.34□□□□□ -0.11
PTPRK-204ENST00000368210 AKR1B1P15121 316 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 CCND2P30279 289 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 IGBP1P78318 339 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 QRICH1Q2TAL8 776 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 FAM83BQ5T0W9 1011 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 ALKBH5Q6P6C2 394 aaKnown RBP14.34□□□□□ -0.11
PTPRK-204ENST00000368210 HACE1Q8IYU2 909 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 UBE2TQ9NPD8 197 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-204ENST00000368210 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 CASP8Q14790 479 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 CASC4Q6P4E1 433 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 ZNF513Q8N8E2 541 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-204ENST00000368210 HESX1Q9UBX0 185 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 PCDHB4Q9Y5E5 795 aa14.34□□□□□ -0.11
PTPRK-204ENST00000368210 SPATA31A1Q5TZJ5 1347 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 PASKQ96RG2 1323 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 A0A0G2JLW4 131 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 TEX33O43247 280 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 EPHB4P54760 987 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 SCYL2Q6P3W7 929 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 MIS12Q9H081 205 aa14.33□□□□□ -0.11
PTPRK-204ENST00000368210 MYO3BQ8WXR4 1341 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 INO80B-WBP1J3KQ70 363 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 RNF8O76064 485 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.121e-6■■■■□ 21.5
PTPRK-204ENST00000368210 TFDP1Q14186 410 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 CC2D1AQ6P1N0 951 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 ADGRF4Q8IZF3 695 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 ANKRD42Q8N9B4 389 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 UHMK1Q8TAS1 419 aaKnown RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 P3H4Q92791 437 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 ZNF148Q9UQR1 794 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 MAP2P11137 1827 aaKnown RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 CTDNEP1O95476 244 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 ITPK1Q13572 414 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 CUL3Q13618 768 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 ALCAMQ13740 583 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 IQCB1Q15051 598 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 DALRD3Q5D0E6 543 aaKnown RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 FAM210AQ96ND0 272 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 MXD3Q9BW11 206 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 FAM205CA6NFA0 338 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 TDP2O95551 362 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 C2orf54Q08AI8 447 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 MTERF2Q49AM1 385 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 MGARPQ8TDB4 240 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 PHF20Q9BVI0 1012 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 SPZ1Q9BXG8 430 aa14.33□□□□□ -0.12
PTPRK-204ENST00000368210 TYW1Q9NV66 732 aaKnown RBP14.33□□□□□ -0.12
PTPRK-204ENST00000368210 POTEB3A0JP26 581 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 POTECB2RU33 542 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 STX2P32856 288 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 GYS2P54840 703 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 CRYMQ14894 314 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 POTEBQ6S5H4 581 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 SFR1Q86XK3 245 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 GSDMBQ8TAX9 411 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 FAM81BQ96LP2 452 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 Q9H521 79 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 SUGT1Q9Y2Z0 365 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
PTPRK-204ENST00000368210 PPLO60437 1756 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms