RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 PTK7Q13308 1070 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
SF3B5-201ENST00000367569 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 TMCO2Q7Z6W1 182 aaPredicted RBP16.59■□□□□ 0.25
SF3B5-201ENST00000367569 NEK8Q86SG6 692 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 ATP6V0A1Q93050 837 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 C8orf76Q96K31 380 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 ASB2Q96Q27 587 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 UNC45AQ9H3U1 944 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 DDX25Q9UHL0 483 aaKnown RBP16.59■□□□□ 0.25
SF3B5-201ENST00000367569 XIRP2A4UGR9 3374 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 KIF28PB7ZC32 967 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 CCNT1O60563 726 aaKnown RBP16.58■□□□□ 0.24
SF3B5-201ENST00000367569 GAS7O60861 476 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 LGR5O75473 907 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 ATP2B1P20020 1258 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 PLCB4Q15147 1175 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 ZNF618Q5T7W0 954 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 LRCH2Q5VUJ6 765 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 RUFY4Q6ZNE9 571 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 SPRED2Q7Z698 418 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
SF3B5-201ENST00000367569 AZI2Q9H6S1 392 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 ARID2Q68CP9 1835 aa16.58■□□□□ 0.24
SF3B5-201ENST00000367569 EVPLQ92817 2033 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 THPOP40225 353 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 KCNJ6P48051 423 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 USP11P51784 963 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 DEFB103AP81534 67 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 MRPS5P82675 430 aaKnown RBP16.57■□□□□ 0.24
SF3B5-201ENST00000367569 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 GRIK4Q16099 956 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 UGCGQ16739 394 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 SWSAP1Q6NVH7 229 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 CNKSR3Q6P9H4 555 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 ABHD15Q6UXT9 468 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 ARNTL2Q8WYA1 636 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 SLC5A5Q92911 643 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 TEKT3Q9BXF9 490 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 SMARCAD1Q9H4L7 1026 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 ERAP1Q9NZ08 941 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 MTCH2Q9Y6C9 303 aa16.57■□□□□ 0.24
SF3B5-201ENST00000367569 LCHNA4D1U4 455 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 TLL1O43897 1013 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 PARNO95453 639 aaKnown RBP16.56■□□□□ 0.24
SF3B5-201ENST00000367569 POU3F3P20264 500 aaPredicted RBP16.56■□□□□ 0.24
SF3B5-201ENST00000367569 STAT5BP51692 787 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
SF3B5-201ENST00000367569 Q4G0T1 1027 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 SERINC5Q86VE9 423 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 FAM177A1Q8N128 213 aaPredicted RBP16.56■□□□□ 0.24
SF3B5-201ENST00000367569 ETNPPLQ8TBG4 499 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 OSBPL7Q9BZF2 842 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 FAM49AQ9H0Q0 323 aaPredicted RBP16.56■□□□□ 0.24
SF3B5-201ENST00000367569 ZNF302Q9NR11 478 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 GABBR1Q9UBS5 961 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 BDP1A6H8Y1 2624 aa16.56■□□□□ 0.24
SF3B5-201ENST00000367569 MICAL3Q7RTP6 2002 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 INSRRP14616 1297 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 HOXC8P31273 242 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 KRT76Q01546 638 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 FAM160B1Q5W0V3 765 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
SF3B5-201ENST00000367569 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 MBOAT7Q96N66 472 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 TUBE1Q9UJT0 475 aa16.55■□□□□ 0.24
SF3B5-201ENST00000367569 TCF20Q9UGU0 1960 aaKnown RBP16.55■□□□□ 0.24
SF3B5-201ENST00000367569 IGSF9BQ9UPX0 1349 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 CYP3A7-CYP3A51PA0A087WV96 503 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 ABHD14A-ACY1A0A1B0GW23 586 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 TMEM150BA6NC51 233 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
SF3B5-201ENST00000367569 PSMD10O75832 226 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 ATG7O95352 703 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 ATP4AP20648 1035 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 CYP3A7P24462 503 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 GJB2P29033 226 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 TMEM62Q0P6H9 643 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
SF3B5-201ENST00000367569 NBR1Q14596 966 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
SF3B5-201ENST00000367569 MIER3Q7Z3K6 550 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 ADAMTS19Q8TE59 1207 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 PPP1R16BQ96T49 567 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 ZBED2Q9BTP6 218 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 DISC1Q9NRI5 854 aa16.54■□□□□ 0.24
SF3B5-201ENST00000367569 IGKV6D-21A0A0A0MT36 114 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 WDR64B1ANS9 1081 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms