RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 P2RX5Q93086 422 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 SLC52A2Q9HAB3 445 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 SLC4A7Q9Y6M7 1214 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 SCN8AQ9UQD0 1980 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 EVPLQ92817 2033 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 A0A0D9SFI3 127 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 KRT4P19013 534 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 FSCBQ5H9T9 825 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 OR9Q1Q8NGQ5 310 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 NAF1Q96HR8 494 aaKnown RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 NHEJ1Q9H9Q4 299 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 TRPC5Q9UL62 973 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 KAT6AQ92794 2004 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 GFPT2O94808 682 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 OCM2P0CE71 109 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 OCMP0CE72 109 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 G2E3Q7L622 706 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 PNMA1Q8ND90 353 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 GPR108Q9NPR9 543 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 G3BP2Q9UN86 482 aaKnown RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 TMEM232C9JQI7 657 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 ZBED1O96006 694 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 CCND2P30279 289 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 TFAMQ00059 246 aaKnown RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 DLGAP5Q15398 846 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 ACAD11Q709F0 780 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 ZNF212Q9UDV6 495 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 CPSF3Q9UKF6 684 aaKnown RBP7.84□□□□□ -1.15
SYNE1-208ENST00000367256 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 CLIC4Q9Y696 253 aa7.84□□□□□ -1.15
SYNE1-208ENST00000367256 RASSF10A6NK89 507 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 FTCDO95954 541 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 KRT33BQ14525 404 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 MORF4L2Q15014 288 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 RHOT2Q8IXI1 618 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 CLIC6Q96NY7 704 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 ACCSQ96QU6 501 aa7.84□□□□□ -1.16
SYNE1-208ENST00000367256 CITO14578 2027 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 SERPINB2P05120 415 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 GRAMD1AQ96CP6 724 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 PCDHA1Q9Y5I3 950 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 RPAP1Q9BWH6 1393 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 XPOTO43592 962 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 IFNA8P32881 189 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ARL6IP4Q66PJ3 421 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 CLEC17AQ6ZS10 378 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 RGS9BPQ6ZS82 235 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 FBXO11Q86XK2 927 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 KLC2Q9H0B6 622 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 TMPRSS15P98073 1019 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 EPAS1Q99814 870 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 MAP3K19Q56UN5 1328 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 GYG2O15488 501 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 KRT8P05787 483 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 STAT2P52630 851 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 DPCR1Q3MIW9 517 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 PDIK1LQ8N165 341 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 HIPK4Q8NE63 616 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 VIPAS39Q9H9C1 493 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 UBE2TQ9NPD8 197 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 STX18Q9P2W9 335 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 COPG1Q9Y678 874 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 CIAO1O76071 339 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ANKRD13CQ8N6S4 541 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ENAHQ8N8S7 591 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ALKBH8Q96BT7 664 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 NRBP2Q9NSY0 501 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 TNKSO95271 1327 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 SPATA31E1Q6ZUB1 1445 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 H0Y3Z8 333 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 MAFGO15525 162 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 SNX2O60749 519 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 MFAP3LO75121 409 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 HADHAP40939 763 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 HNRNPH2P55795 449 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 CAPRIN2Q6IMN6 1127 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ABI1Q8IZP0 508 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 PYROXD1Q8WU10 500 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 FSD1LQ9BXM9 530 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 KMT5AQ9NQR1 393 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 MRGBPQ9NV56 204 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 DBNLQ9UJU6 430 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 CA4P22748 312 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 E2F4Q16254 413 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 RBBP7Q16576 425 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 SLC7A3Q8WY07 619 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 HSPH1Q92598 858 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 PPARGC1AQ9UBK2 798 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 APOBEC2Q9Y235 224 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 POTEB3A0JP26 581 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 PPIP5K2O43314 1243 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 KDM1AO60341 852 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 KRT37O76014 449 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 ESRRBO95718 433 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 PDIA3P30101 505 aaKnown RBP7.83□□□□□ -1.16
SYNE1-208ENST00000367256 AP2B1P63010 937 aa7.83□□□□□ -1.16
SYNE1-208ENST00000367256 CYP4A11Q02928 519 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms