RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 A0A0G2JLW4 131 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 EIF3CLB5ME19 914 aaKnown RBP9.29□□□□□ -0.92
SYNE1-206ENST00000367253 AKR1B15C9JRZ8 316 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-206ENST00000367253 ECE2O60344 883 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 ECEL1O95672 775 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 GNGT1P63211 74 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PTK2BQ14289 1009 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PRPSAP1Q14558 356 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TRIM60Q495X7 471 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 HABP4Q5JVS0 413 aaKnown RBP9.29□□□□□ -0.92
SYNE1-206ENST00000367253 STYK1Q6J9G0 422 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TSHZ1Q6ZSZ6 1077 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TBC1D9Q6ZT07 1266 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 ST13P5Q8NFI4 369 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PRRG1O14668 218 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 AP1G2O75843 785 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 BMP3P12645 472 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 DAB2P98082 770 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 UBXN1Q04323 297 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 SNX17Q15036 470 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 INAVAQ3KP66 663 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 CARD9Q9H257 536 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 SCOCQ9UIL1 159 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PCDHB7Q9Y5E2 793 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 STXBP3O00186 592 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 ANXA1P04083 346 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 CHGBP05060 677 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 DDX5P17844 614 aaKnown RBP9.29□□□□□ -0.92
SYNE1-206ENST00000367253 SCP2P22307 547 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 MCM7P33993 719 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 ESRRGP62508 458 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TTC30BQ8N4P2 665 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TMEM87BQ96K49 555 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 FAM129AQ9BZQ8 928 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 ZFYVE1Q9HBF4 777 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 UBN1Q9NPG3 1134 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 KLHL3Q9UH77 587 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PTCH1Q13635 1447 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PRR36Q9H6K5 1346 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 KDM3AQ9Y4C1 1321 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 EFCAB14O75071 495 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 UPP2O95045 317 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PHKA2P46019 1235 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 TUBA3CQ13748 450 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 LETM2Q2VYF4 491 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 VWA3BQ502W6 1294 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 PLA2G4DQ86XP0 818 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 BCAS4Q8TDM0 211 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
SYNE1-206ENST00000367253 F6X3S4 739 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 APOEP02649 317 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ALDH7A1P49419 539 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 FAM102BQ5T8I3 360 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 PPANQ9NQ55 473 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ADAMTS13Q76LX8 1427 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 TMEM131LA2VDJ0 1609 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 MCF2LO15068 1137 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 STAT2P52630 851 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 PKN2Q16513 984 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 USP50Q70EL3 339 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 OR6J1Q8NGC5 347 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 SOCS4Q8WXH5 440 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 SERPINB13Q9UIV8 391 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ARHGAP42A6NI28 874 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 F13A1P00488 732 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 GNRH1P01148 92 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 POMCP01189 267 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 MYBL2P10244 700 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ACADMP11310 421 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 FLT3P36888 993 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 BNIP1Q12981 228 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ST13P4Q8IZP2 240 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 SPATA5Q8NB90 893 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 CFAP61Q8NHU2 1237 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 RFWD2Q8NHY2 731 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 IRF2BPLQ9H1B7 796 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 DDX28Q9NUL7 540 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 USP6P35125 1406 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 KIF24Q5T7B8 1368 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ADGRB1O14514 1584 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ANKRD65E5RJM6 399 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 PCCAP05165 728 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 S100A9P06702 114 aaKnown RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 SRGAP2CP0DJJ0 459 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 PHKG2P15735 406 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 FBLN1P23142 703 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 IFNA8P32881 189 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 KRT20P35900 424 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 RAP1GDS1P52306 607 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 KYAT1Q16773 422 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 LGSNQ5TDP6 509 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 FAM117BQ6P1L5 589 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 UBE2OQ9C0C9 1292 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms