RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ADCY1Q08828 1119 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 AP3B2Q13367 1082 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 IPO5O00410 1097 aaKnown RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 SNCBQ16143 134 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 CENPUQ71F23 418 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 NT5C2P49902 561 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 NUDT18Q6ZVK8 323 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 NCLNQ969V3 563 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 FAF2Q96CS3 445 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 GOLGA8IPA6NC78 632 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 GOLGA8JA6NMD2 632 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 HOXA13P31271 388 aaPredicted RBP16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 RBL2Q08999 1139 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 BBS9Q3SYG4 887 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 MMP1P03956 469 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 MXD4Q14582 209 aaPredicted RBP16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 RNF14Q9UBS8 474 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 ATP8A1Q9Y2Q0 1164 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 EXOC1LA0A1B0GW35 172 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 THNSL1Q8IYQ7 743 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 ACAP3Q96P50 834 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 ETF1P62495 437 aaKnown RBP16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 ZSCAN26Q16670 478 aa16.86■□□□□ 0.29
NUCKS1-201ENST00000367142 RASGRF2O14827 1237 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 PPP1R12AO14974 1030 aaPredicted RBP16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 MAGEB5Q9BZ81 275 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 EPB41L5Q9HCM4 733 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 POLR3EQ9NVU0 708 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 RNF123Q5XPI4 1314 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 EEF1B2P24534 225 aaKnown RBP16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 CDK8P49336 464 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 RASIP1Q5U651 963 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 KRT39Q6A163 491 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 PDIK1LQ8N165 341 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 DYNLL2Q96FJ2 89 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 MOCS3O95396 460 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 UNC5CLQ8IV45 518 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 PDCD6IPQ8WUM4 868 aaKnown RBP16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 AFG1LQ8WV93 481 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 POLR3CQ9BUI4 534 aaPredicted RBP16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 HSPA4LO95757 839 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 CDC25BP30305 580 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 TOGARAM2Q6ZUX3 1019 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 SLC35F6Q8N357 371 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 ASNSD1Q9NWL6 643 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 CDC23Q9UJX2 597 aa16.85■□□□□ 0.29
NUCKS1-201ENST00000367142 ANP32DO95626 131 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 HADHAP40939 763 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 PEX3P56589 373 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 PYROXD1Q8WU10 500 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 TEKT4Q8WW24 435 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 NRBF2Q96F24 287 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 TJP3O95049 919 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 MTMR1Q13613 665 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 DYRK4Q9NR20 520 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 TMEM63CQ9P1W3 806 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 G3BP2Q9UN86 482 aaKnown RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 PCDHA5Q9Y5H7 936 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 MECOMQ03112 1051 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 TTLL4Q14679 1199 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 ZKSCAN8Q15776 578 aaPredicted RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 MAPK6Q16659 721 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 IMPG1Q17R60 797 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 MCPH1Q8NEM0 835 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 EEF2KMTQ96G04 330 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 CNOT10Q9H9A5 744 aaKnown RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 NGRNQ9NPE2 291 aaKnown RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 GPC3P51654 580 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 H3BRJ5 948 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 SH2B2O14492 632 aaPredicted RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 CFLARO15519 480 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 C21orf2O43822 256 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 PYGBP11216 843 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 KCTD16Q68DU8 428 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 TRIM59Q8IWR1 403 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 SH3KBP1Q96B97 665 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 TXLNGQ9NUQ3 528 aa16.84■□□□□ 0.29
NUCKS1-201ENST00000367142 SLFN14P0C7P3 912 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 RWDD2BP57060 319 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms