RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CCDC17Q96LX7 622 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 LMCD1Q9NZU5 365 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 ZNF711Q9Y462 761 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 ZMYM4Q5VZL5 1548 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 SNX2O60749 519 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 GSPT1P15170 499 aaKnown RBP17.94■□□□□ 0.46
NID1-202ENST00000366595 TCP10Q12799 353 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 GCOM2Q9BZD3 368 aaPredicted RBP17.94■□□□□ 0.46
NID1-202ENST00000366595 SAYSD1Q9NPB0 183 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 EHD2Q9NZN4 543 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 ACSL3O95573 720 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 GCP02774 474 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 PDHA1P08559 390 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 UBE3CQ15386 1083 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 OR6B2Q6IFH4 312 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
NID1-202ENST00000366595 MAGEB5Q9BZ81 275 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
NID1-202ENST00000366595 C16orf96A6NNT2 1141 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 ARFIP2P53365 341 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 PPP2R2AP63151 447 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 FRA10AC1Q70Z53 315 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 STRIP2Q9ULQ0 834 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 FAM170AA1A519 330 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 HNRNPRO43390 633 aaKnown RBP17.94■□□□□ 0.46
NID1-202ENST00000366595 IL10P22301 178 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 CXCR5P32302 372 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 FAF2Q96CS3 445 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 PCDHA1Q9Y5I3 950 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
NID1-202ENST00000366595 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 ICA1Q05084 483 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 UBE2TQ9NPD8 197 aaPredicted RBP17.93■□□□□ 0.46
NID1-202ENST00000366595 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 POLA2Q14181 598 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 KIF22Q14807 665 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 TBC1D23Q9NUY8 699 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 RCOR1Q9UKL0 485 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 SLFN13Q68D06 897 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 KIRREL3Q8IZU9 778 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 TOM1O60784 492 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 NT5C2P49902 561 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
NID1-202ENST00000366595 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
NID1-202ENST00000366595 THAP11Q96EK4 314 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 PKD2L2Q9NZM6 624 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 TRAF3IP3Q9Y228 551 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 A0A0D9SFI3 127 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 CCDC78A2IDD5 438 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 LRRN2O75325 713 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 SMARCA1P28370 1054 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 ALKBH5Q6P6C2 394 aaKnown RBP17.93■□□□□ 0.46
NID1-202ENST00000366595 SMYD3Q9H7B4 428 aa17.93■□□□□ 0.46
NID1-202ENST00000366595 DNAJC6O75061 913 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 FGGP02679 453 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 CYP4A11Q02928 519 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 PTH1RQ03431 593 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 SLC26A7Q8TE54 656 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 RUBCNQ92622 972 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 CYP26B1Q9NR63 512 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 FRMPD2Q68DX3 1309 aaPredicted RBP17.92■□□□□ 0.46
NID1-202ENST00000366595 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 CDH2P19022 906 aaPredicted RBP17.92■□□□□ 0.46
NID1-202ENST00000366595 RAD23BP54727 409 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 TRIP13Q15645 432 aaPredicted RBP17.92■□□□□ 0.46
NID1-202ENST00000366595 C11orf57Q6ZUT1 292 aaPredicted RBP17.92■□□□□ 0.46
NID1-202ENST00000366595 ABI1Q8IZP0 508 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 FAM161BQ96MY7 647 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 EPAS1Q99814 870 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
NID1-202ENST00000366595 GRID2IPA4D2P6 1211 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 DEFA1P59665 94 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 DEFA3P59666 94 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 MIS18BP1Q6P0N0 1132 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 KRT27Q7Z3Y8 459 aa17.92■□□□□ 0.46
NID1-202ENST00000366595 SEPT9Q9UHD8 586 aaPredicted RBP17.92■□□□□ 0.46
NID1-202ENST00000366595 WBP4O75554 376 aaKnown RBP17.91■□□□□ 0.46
NID1-202ENST00000366595 SCRN1Q12765 414 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 RNF139Q8WU17 664 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 ITM2BQ9Y287 266 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 WDR47O94967 919 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 CIITAP33076 1130 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 MFSD14BQ5SR56 506 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 SH3GL2Q99962 352 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 BLOC1S6Q9UL45 172 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 MFAP3LO75121 409 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 IMPG1Q17R60 797 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 BEND6Q5SZJ8 279 aaPredicted RBP17.91■□□□□ 0.46
NID1-202ENST00000366595 TTC8Q8TAM2 541 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 AP1M1Q9BXS5 423 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 EMILIN3Q9NT22 766 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms