RNA–Protein interactions for RNA: ENST00000365155.1

RNU6-1240P-201, Transcript of RNA, U6 small nuclear 1240, pseudogene, humanhuman

BASIC

Gene RNU6-1240P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1240P-201ENST00000365155 SMAD4Q13485 552 aaKnown RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 TMEM132BQ14DG7 1078 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 DHCR24Q15392 516 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 PRR31Q5SQ13 230 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 FILIP1Q7Z7B0 1213 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SAPCD2Q86UD0 394 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 AFAP1L2Q8N4X5 818 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 TTLL6Q8N841 843 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 KIAA1958Q8N8K9 716 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 DTX3Q8N9I9 347 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 TP53I13Q8NBR0 393 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ZSCAN18Q8TBC5 510 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ZNF526Q8TF50 670 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 CHAC2Q8WUX2 184 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ASB15Q8WXK1 588 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ZBTB8AQ96BR9 441 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 FOXRED1Q96CU9 486 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ELF4Q99607 663 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 TMX1Q9H3N1 280 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SPC25Q9HBM1 224 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SLC39A2Q9NP94 309 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SPTLC3Q9NUV7 552 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 THG1LQ9NWX6 298 aaKnown RBP2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ZKSCAN5Q9Y2L8 839 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SPO11Q9Y5K1 396 aa2.79□□□□□ -1.96
RNU6-1240P-201ENST00000365155 A0A1B0GTL3 188 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SH3D21A4FU49 640 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 FOXP2O15409 715 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 GAS7O60861 476 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 DNAJC6O75061 913 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 HIP1RO75146 1068 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 FKBP9O95302 570 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 CYP17A1P05093 508 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 COL6A1P12109 1028 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 RPL13P26373 211 aaKnown RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 CANXP27824 592 aaKnown RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 AOAHP28039 575 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 MC4RP32245 332 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SOX5P35711 763 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ID4P47928 161 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 LSSP48449 732 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 AFF3P51826 1226 aaKnown RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 MLLT6P55198 1093 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SMAD3P84022 425 aaKnown RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 AMPD3Q01432 767 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 STRN3Q13033 797 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ZNF174Q15697 407 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SMAD2Q15796 467 aaKnown RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 SKIDA1Q1XH10 827 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 VMACQ2NL98 169 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 PHF19Q5T6S3 580 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 RNF187Q5TA31 235 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 VASNQ6EMK4 673 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 FKBP9P1Q75LS8 142 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 RTN4RL1Q86UN2 441 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ADGRG2Q8IZP9 1017 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 OR2W6PQ8NHA6 318 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 IGDCC4Q8TDY8 1250 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 C16orf92Q96LL3 132 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ZSWIM3Q96MP5 696 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 GPR101Q96P66 508 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 GBP4Q96PP9 640 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 TMEM209Q96SK2 561 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 AMNQ9BXJ7 453 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 IRF2BPLQ9H1B7 796 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ACSS2Q9NR19 701 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 DLL4Q9NR61 685 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 ASB1Q9Y576 335 aa2.78□□□□□ -1.96
RNU6-1240P-201ENST00000365155 PRAMEF22A3QJZ6 481 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 RFXAPO00287 272 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 NEMP1O14524 444 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 NUAK1O60285 661 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 ZEB2O60315 1214 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 HOXA5P20719 270 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 PTGS1P23219 599 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 IL13P35225 146 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 GLRBP48167 497 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 FNTBP49356 437 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 KPNA1P52294 538 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 IL2P60568 153 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 NFKB2Q00653 900 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 SART3Q15020 963 aaKnown RBP2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 PRAMEF18Q5VWM3 479 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 CIAPIN1Q6FI81 312 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 ESRP1Q6NXG1 681 aaKnown RBP2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 LRSAM1Q6UWE0 723 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 LHFPL2Q6ZUX7 228 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 DDX42Q86XP3 938 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 EFHBQ8N7U6 833 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 STPG3Q8N7X2 389 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 LINC01356Q8N9X3 169 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 RELTQ969Z4 430 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 CLIC6Q96NY7 704 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 IFT22Q9H7X7 185 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 ZMAT4Q9H898 229 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 EMC7Q9NPA0 242 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 INCENPQ9NQS7 918 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 KCND1Q9NSA2 647 aa2.77□□□□□ -1.97
RNU6-1240P-201ENST00000365155 UCKL1Q9NWZ5 548 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms