RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ATG7O95352 703 aa23.06■■□□□ 1.28
SHISA4-201ENST00000362011 QARSP47897 775 aaKnown RBP23.06■■□□□ 1.28
SHISA4-201ENST00000362011 ZSCAN23Q3MJ62 389 aa23.06■■□□□ 1.28
SHISA4-201ENST00000362011 DUSP28Q4G0W2 176 aa23.06■■□□□ 1.28
SHISA4-201ENST00000362011 ABHD15Q6UXT9 468 aa23.06■■□□□ 1.28
SHISA4-201ENST00000362011 LARP4BQ92615 738 aaKnown RBP23.06■■□□□ 1.28
SHISA4-201ENST00000362011 ZSWIM4Q9H7M6 989 aa23.06■■□□□ 1.28
SHISA4-201ENST00000362011 BLOC1S4Q9NUP1 217 aa23.06■■□□□ 1.28
SHISA4-201ENST00000362011 NOP56O00567 594 aaKnown RBP23.05■■□□□ 1.28
SHISA4-201ENST00000362011 AFMP43652 599 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 PSMC5P62195 406 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 TNFAIP2Q03169 654 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 POSTNQ15063 836 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 TMEM63BQ5T3F8 832 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 KCNK18Q7Z418 384 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 SH3RF1Q7Z6J0 888 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 SEPT1Q8WYJ6 367 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 PAGE5Q96GU1 130 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 SPATA33Q96N06 139 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 DNM3Q9UQ16 869 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 TELO2Q9Y4R8 837 aa23.05■■□□□ 1.28
SHISA4-201ENST00000362011 COL6A3P12111 3177 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 GSTTP1A0A1W2PQM5 241 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 E9PMD0 336 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 SMPD1P17405 629 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 MCM6Q14566 821 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
SHISA4-201ENST00000362011 RBM43Q6ZSC3 357 aaKnown RBP23.04■■□□□ 1.28
SHISA4-201ENST00000362011 SV2BQ7L1I2 683 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 ATP6V0A1Q93050 837 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
SHISA4-201ENST00000362011 NACC1Q96RE7 527 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 KBTBD4Q9NVX7 518 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 GABBR1Q9UBS5 961 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 FAM184BQ9ULE4 1060 aa23.04■■□□□ 1.28
SHISA4-201ENST00000362011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.03■■□□□ 1.28
SHISA4-201ENST00000362011 BACH1O14867 736 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 LYPLA2O95372 231 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 CYBAP13498 195 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 AMPD3Q01432 767 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 UGCGQ16739 394 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 SWSAP1Q6NVH7 229 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 CCDC60Q8IWA6 550 aaPredicted RBP23.03■■□□□ 1.28
SHISA4-201ENST00000362011 C4orf19Q8IY42 314 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 CKAP2LQ8IYA6 745 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 GRAMD1CQ8IYS0 662 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 C7orf61Q8IZ16 206 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 OR6J1Q8NGC5 347 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 STAMQ92783 540 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 GPR20Q99678 358 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 C11orf49Q9H6J7 331 aa23.03■■□□□ 1.28
SHISA4-201ENST00000362011 WRAP73Q9P2S5 460 aaPredicted RBP23.03■■□□□ 1.28
SHISA4-201ENST00000362011 IGSF9BQ9UPX0 1349 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 IGKV6D-21A0A0A0MT36 114 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 GTPBP6O43824 516 aaPredicted RBP23.02■■□□□ 1.28
SHISA4-201ENST00000362011 EYA4O95677 639 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 PRR29P0C7W0 189 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 AKR1A1P14550 325 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 TCF7P36402 384 aaPredicted RBP23.02■■□□□ 1.28
SHISA4-201ENST00000362011 MDM2Q00987 491 aaPredicted RBP23.02■■□□□ 1.28
SHISA4-201ENST00000362011 PNOCQ13519 176 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 DHX8Q14562 1220 aaKnown RBP23.02■■□□□ 1.28
SHISA4-201ENST00000362011 HSDL1Q3SXM5 330 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 FAM160B1Q5W0V3 765 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 LRRC27Q9C0I9 530 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 ZNF302Q9NR11 478 aa23.02■■□□□ 1.28
SHISA4-201ENST00000362011 SYCE3A1L190 88 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 ADCY6O43306 1168 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 MYL1P05976 194 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 PLA2G4BP0C869 781 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 COL6A1P12109 1028 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 PRKAR2AP13861 404 aaKnown RBP23.01■■□□□ 1.27
SHISA4-201ENST00000362011 PSMC6P62333 389 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 LRIT3Q3SXY7 679 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 TRPV1Q8NER1 839 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 PPTC7Q8NI37 304 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 MTRQ99707 1265 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 KIAA1468Q9P260 1216 aa23.01■■□□□ 1.27
SHISA4-201ENST00000362011 ZMYND8Q9ULU4 1186 aaPredicted RBP23.01■■□□□ 1.27
SHISA4-201ENST00000362011 LGR5O75473 907 aa23■■□□□ 1.27
SHISA4-201ENST00000362011 SSBP05455 408 aaKnown RBP eCLIP23■■□□□ 1.27
SHISA4-201ENST00000362011 PTGS1P23219 599 aa23■■□□□ 1.27
SHISA4-201ENST00000362011 CACNB2Q08289 660 aaPredicted RBP23■■□□□ 1.27
SHISA4-201ENST00000362011 SYT2Q8N9I0 419 aaPredicted RBP23■■□□□ 1.27
SHISA4-201ENST00000362011 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
SHISA4-201ENST00000362011 AFAP1L1Q8TED9 768 aa23■■□□□ 1.27
SHISA4-201ENST00000362011 PIGOQ8TEQ8 1089 aa23■■□□□ 1.27
SHISA4-201ENST00000362011 GNEQ9Y223 722 aaKnown RBP23■■□□□ 1.27
SHISA4-201ENST00000362011 EMSYQ7Z589 1322 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 A0A087WWV3 80 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 SMC2O95347 1197 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 XRCC6P12956 609 aaKnown RBP eCLIP22.99■■□□□ 1.27
SHISA4-201ENST00000362011 SLC12A3P55017 1021 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 DPYDQ12882 1025 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 LHX8Q68G74 356 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 TLK2Q86UE8 772 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 AFG1LQ8WV93 481 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 ERCC4Q92889 916 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms