RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CXCL9Q07325 125 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 NAB2Q15742 525 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 CRELD2Q6UXH1 353 aaPredicted RBP20.83■□□□□ 0.93
CMTM3-201ENST00000361909 CCHCR1Q8TD31 782 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 BAP1Q92560 729 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 FAXDC2Q96IV6 333 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 CALR3Q96L12 384 aaKnown RBP20.83■□□□□ 0.93
CMTM3-201ENST00000361909 PRMT6Q96LA8 375 aaPredicted RBP20.83■□□□□ 0.93
CMTM3-201ENST00000361909 KRT12Q99456 494 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 TRIM9Q9C026 710 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 TRIM6Q9C030 488 aaPredicted RBP20.83■□□□□ 0.93
CMTM3-201ENST00000361909 SPON1Q9HCB6 807 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 PI4KBQ9UBF8 816 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 hCG_1642624A0A1W2PR95 340 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 H0YGN5 161 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 CLNS1AP54105 237 aaKnown RBP20.83■□□□□ 0.92
CMTM3-201ENST00000361909 SPDYCQ5MJ68 293 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 MEI1Q5TIA1 1274 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 CENPPQ6IPU0 288 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 MAB21L3Q8N8X9 362 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 USP38Q8NB14 1042 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 PNMA1Q8ND90 353 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 PCDHA4Q9UN74 947 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 NFS1Q9Y697 457 aa20.83■□□□□ 0.92
CMTM3-201ENST00000361909 SPDYE2BA6NHP3 402 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 BHMG1C9JSJ3 638 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-201ENST00000361909 SPDYE6P0CI01 402 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 HPDP32754 393 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-201ENST00000361909 HSD17B3P37058 310 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 TNIP1Q15025 636 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 LRCH2Q5VUJ6 765 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 CIAPIN1Q6FI81 312 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 FAM228AQ86W67 206 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 CENPTQ96BT3 561 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 RSRC1Q96IZ7 334 aaKnown RBP20.82■□□□□ 0.92
CMTM3-201ENST00000361909 MS4A14Q96JA4 679 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 HAUS2Q9NVX0 235 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 SALL4Q9UJQ4 1053 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 ESYT3A0FGR9 886 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 DNM1LO00429 736 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 RIPK1Q13546 671 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 RRAGAQ7L523 313 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 SRBD1Q8N5C6 995 aaKnown RBP20.82■□□□□ 0.92
CMTM3-201ENST00000361909 DAGLBQ8NCG7 672 aa20.82■□□□□ 0.92
CMTM3-201ENST00000361909 TDRD3Q9H7E2 651 aaKnown RBP20.82■□□□□ 0.92
CMTM3-201ENST00000361909 ATRNL1Q5VV63 1379 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 BTNL10A8MVZ5 291 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 SERPING1P05155 500 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 RASSF7Q02833 373 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 LRRC63Q05C16 580 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 ZNF844Q08AG5 666 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 DLGAP5Q15398 846 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 CCDC17Q96LX7 622 aa20.81■□□□□ 0.92
CMTM3-201ENST00000361909 FAM207AQ9NSI2 230 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-201ENST00000361909 ZSCAN5CA6NGD5 496 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-201ENST00000361909 RAD51CO43502 376 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 PDHBP11177 359 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 CTNNA1P35221 906 aaKnown RBP20.8■□□□□ 0.92
CMTM3-201ENST00000361909 SLC1A4P43007 532 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 ZKSCAN8Q15776 578 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-201ENST00000361909 CACNA2D4Q7Z3S7 1137 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 ZFPM1Q8IX07 1006 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 CCT6BQ92526 530 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 PBKQ96KB5 322 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 SCLT1Q96NL6 688 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 TMEM47Q9BQJ4 181 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 TMOD2Q9NZR1 351 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 CCDC194A0A1B0GVG4 234 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 SHMT1P34896 483 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 GNAQP50148 359 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 ASIC1P78348 528 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 TAF4BQ92750 862 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 MMRN2Q9H8L6 949 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 CEP72Q9P209 647 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
CMTM3-201ENST00000361909 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-201ENST00000361909 RTN2O75298 545 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 PALMO75781 387 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 RPS12P25398 132 aaKnown RBP20.79■□□□□ 0.92
CMTM3-201ENST00000361909 CACNB3P54284 484 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 HLTFQ14527 1009 aaKnown RBP eCLIP20.79■□□□□ 0.92
CMTM3-201ENST00000361909 FKBP1CQ5VVH2 108 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 HGSNATQ68CP4 663 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 HVCN1Q96D96 273 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 IGKV6D-41A0A0C4DH26 115 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 CFAP73A6NFT4 308 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 BUB1O43683 1085 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 ECHS1P30084 290 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 EIF3BP55884 814 aaKnown RBP20.79■□□□□ 0.92
CMTM3-201ENST00000361909 GFPT1Q06210 699 aaPredicted RBP20.79■□□□□ 0.92
CMTM3-201ENST00000361909 TCP10Q12799 353 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 STK4Q13043 487 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 GRM4Q14833 912 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 CABP7Q86V35 215 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 NLGN2Q8NFZ4 835 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 CEP95Q96GE4 821 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 ATP8B3O60423 1300 aa20.79■□□□□ 0.92
CMTM3-201ENST00000361909 ATAD5Q96QE3 1844 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms