RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CD248Q9HCU0 757 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 ARHGAP20Q9P2F6 1191 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TMEM131LA2VDJ0 1609 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 PDE2AO00408 941 aaPredicted RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 SLC18A3Q16572 532 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TTI2Q6NXR4 508 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 PDXDC2PQ6P474 469 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 PPP1R21Q6ZMI0 780 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 MDM1Q8TC05 714 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 DNAJC7Q99615 494 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 AMNQ9BXJ7 453 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 NBPF3Q9H094 633 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TECPR2O15040 1411 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 FAM205AQ6ZU69 1335 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 A0A087X0T9 212 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 GOLGA8IPA6NC78 632 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 GOLGA8JA6NMD2 632 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 FAM228BP0C875 321 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TRIM49P0CI25 452 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TRIM49CP0CI26 452 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 MYBL2P10244 700 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 FAM102BQ5T8I3 360 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 PAPD7Q5XG87 772 aaKnown RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 ELOA2Q8IYF1 753 aaPredicted RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 LBHD1Q9BQE6 289 aaPredicted RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 0
COL6A1-201ENST00000361866 ADAM33Q9BZ11 813 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 USP17L10C9JJH3 530 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 ORC4O43929 436 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 CD19P15391 556 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 TMED2Q15363 201 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 LIN9Q5TKA1 542 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 KCNV2Q8TDN2 545 aa15.06■□□□□ 0
COL6A1-201ENST00000361866 CNOT10Q9H9A5 744 aaKnown RBP15.06■□□□□ 0
COL6A1-201ENST00000361866 MIER3Q7Z3K6 550 aa15.05■□□□□ 0
COL6A1-201ENST00000361866 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.05■□□□□ 0
COL6A1-201ENST00000361866 TEKT1Q969V4 418 aa15.05■□□□□ 0
COL6A1-201ENST00000361866 RUNDC3BQ96NL0 473 aa15.05■□□□□ 0
COL6A1-201ENST00000361866 PNMA2Q9UL42 364 aa15.05■□□□□ 0
COL6A1-201ENST00000361866 ECEL1O95672 775 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 NR3C1P04150 777 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 GLI1P08151 1106 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 FBXL16Q8N461 479 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 MMGT1Q8N4V1 131 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 ANO3Q9BYT9 981 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 CPSF2Q9P2I0 782 aaKnown RBP15.05■□□□□ -0
COL6A1-201ENST00000361866 CHORDC1Q9UHD1 332 aaPredicted RBP15.05■□□□□ -0
COL6A1-201ENST00000361866 ATP2A2P16615 1042 aaKnown RBP15.05■□□□□ -0
COL6A1-201ENST00000361866 HP1BP3Q5SSJ5 553 aaPredicted RBP15.05■□□□□ -0
COL6A1-201ENST00000361866 NT5DC1Q5TFE4 455 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 ARMC9Q7Z3E5 817 aa15.05■□□□□ -0
COL6A1-201ENST00000361866 GCFC2P16383 781 aaKnown RBP15.04■□□□□ -0
COL6A1-201ENST00000361866 PDE6CP51160 858 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 C12orf60Q5U649 245 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 TTBK2Q6IQ55 1244 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 PROM2Q8N271 834 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 FAM167BQ9BTA0 163 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 PACSIN1Q9BY11 444 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 WNT7AO00755 349 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 SEC23AQ15436 765 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 PARP9Q8IXQ6 854 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 ZNF512BQ96KM6 892 aaPredicted RBP15.04■□□□□ -0
COL6A1-201ENST00000361866 HEMGNQ9BXL5 484 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 PNMA6FA0A0J9YX94 578 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 FGFR4P22455 802 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 KLRK1P26718 216 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 EIF3BP55884 814 aaKnown RBP15.04■□□□□ -0
COL6A1-201ENST00000361866 CCDC62Q6P9F0 684 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 SRRM1Q8IYB3 904 aaKnown RBP15.04■□□□□ -0
COL6A1-201ENST00000361866 PAF1Q8N7H5 531 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 MTMR8Q96EF0 704 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 CHMP6Q96FZ7 201 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 CXorf56Q9H5V9 222 aa15.04■□□□□ -0
COL6A1-201ENST00000361866 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 WTIPA6NIX2 430 aaPredicted RBP15.03■□□□□ -0
COL6A1-201ENST00000361866 DRAP1Q14919 205 aaPredicted RBP15.03■□□□□ -0
COL6A1-201ENST00000361866 LRRC8CQ8TDW0 803 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 TXNDC9O14530 226 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 MAPK4P31152 587 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 SCYL3Q8IZE3 742 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 ERGIC2Q96RQ1 377 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 C7orf25Q9BPX7 421 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 HSPA1LP34931 641 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 GCLMP48507 274 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 PMS2P54278 862 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 CLUL1Q15846 466 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 XKR9Q5GH70 373 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 ANKS1AQ92625 1134 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 CYFIP2Q96F07 1278 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 HSD3B7Q9H2F3 369 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 PARVGQ9HBI0 331 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 SSU72P8A0A1W2PR75 194 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 BAG2O95816 211 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 PTK2Q05397 1052 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 KIRREL3Q8IZU9 778 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 CASKIN2Q8WXE0 1202 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 ARHGEF10LQ9HCE6 1279 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms