RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CD302Q8IX05 232 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 CERKQ8TCT0 537 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 NAF1Q96HR8 494 aaKnown RBP13.8□□□□□ -0.2
VAMP1-201ENST00000361716 PYM1Q9BRP8 204 aaKnown RBP13.8□□□□□ -0.2
VAMP1-201ENST00000361716 TTYH3Q9C0H2 523 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 SH3BP1Q9Y3L3 701 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
VAMP1-201ENST00000361716 ITIH3Q06033 890 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 TRAF1Q13077 416 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 ZNF211Q13398 564 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-201ENST00000361716 MIIPQ5JXC2 388 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 TMEM154Q6P9G4 183 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-201ENST00000361716 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 FAM129AQ9BZQ8 928 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 EBF2Q9HAK2 575 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 GGA2Q9UJY4 613 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 PCDHA4Q9UN74 947 aa13.8□□□□□ -0.2
VAMP1-201ENST00000361716 hCG_2014768A0A024R1R8 64 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 PGRMC1O00264 195 aaKnown RBP13.79□□□□□ -0.2
VAMP1-201ENST00000361716 UBE4AQ14139 1066 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 MAGEC3Q8TD91 643 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 TBCKQ8TEA7 893 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 ABCB4P21439 1286 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 FGFR4P22455 802 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 MSH2P43246 934 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-201ENST00000361716 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 GLG1Q92896 1179 aa13.79□□□□□ -0.2
VAMP1-201ENST00000361716 DHTKD1Q96HY7 919 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-201ENST00000361716 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-201ENST00000361716 LINGO3P0C6S8 592 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CUL1Q13616 776 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 LACTB2Q53H82 288 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 HERC4Q5GLZ8 1057 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CNNM4Q6P4Q7 775 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 RUBCNQ92622 972 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 TBK1Q9UHD2 729 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 BCS1LQ9Y276 419 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 RIC1Q4ADV7 1423 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 STXBP3O00186 592 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 LUC7L3O95232 432 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 FGGP02679 453 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CCND1P24385 295 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 RAB27AP51159 221 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 B4GALNT2Q8NHY0 566 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CELF1Q92879 486 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 DCP1AQ9NPI6 582 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 GLI3P10071 1580 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 TRIM28Q13263 835 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 TMEM266Q2M3C6 531 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 ERFEQ4G0M1 354 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 MREGQ8N565 214 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 ZMYND12Q9H0C1 365 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CNOT10Q9H9A5 744 aaKnown RBP13.78□□□□□ -0.2
VAMP1-201ENST00000361716 RNF14Q9UBS8 474 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 PTPN22Q9Y2R2 807 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 USH1CQ9Y6N9 552 aa13.78□□□□□ -0.2
VAMP1-201ENST00000361716 CFAP73A6NFT4 308 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 F8VZ95 297 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 ABL2P42684 1182 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 SLC29A2Q14542 456 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 ASIC2Q16515 512 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 FAM83BQ5T0W9 1011 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 ERMARDQ5T6L9 678 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 RNF220Q5VTB9 566 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 KRT79Q5XKE5 535 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 PDXDC1Q6P996 788 aa13.77□□□□□ -0.2
VAMP1-201ENST00000361716 MRRFQ96E11 262 aaKnown RBP13.77□□□□□ -0.2
VAMP1-201ENST00000361716 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 SUN1O94901 812 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 GHRP10912 638 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 HIBADHP31937 336 aaKnown RBP13.77□□□□□ -0.21
VAMP1-201ENST00000361716 GBP1P32455 592 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 RFC5P40937 340 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 NCALDP61601 193 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 CALCRLQ16602 461 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 TMEM237Q96Q45 408 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 PIGSQ96S52 555 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms