RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MANSC4A6NHS7 340 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 EDNRBP24530 442 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 ASIC1P78348 528 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 GOLGA8FQ08AF8 430 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 GOLGA8DPQ0D2H9 430 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 STXBP2Q15833 593 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 HSP90AA4PQ58FG1 418 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 TRIM9Q9C026 710 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 SAMSN1Q9NSI8 373 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 WRAP73Q9P2S5 460 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 DOCK3Q8IZD9 2030 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 ATP8B1O43520 1251 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 SSBP05455 408 aaKnown RBP eCLIP14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 FCER1AP12319 257 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 CLCN6P51797 869 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 KCNB1Q14721 858 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 IFNL1Q8IU54 200 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 HSD17B14Q9BPX1 270 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 CARD6Q9BX69 1037 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 CPA4Q9UI42 421 aa14.58□□□□□ -0.08
SQSTM1-201ENST00000360718 KLRC4O43908 158 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 TADA3O75528 432 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 CCNE2O96020 404 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 CCDC175P0C221 793 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 KCNA2P16389 499 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 MUTP22033 750 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 SP2Q02086 613 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 CTTNQ14247 550 aaKnown RBP14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 EPHA7Q15375 998 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 ZNF658Q5TYW1 1059 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 MIER3Q7Z3K6 550 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 NEK9Q8TD19 979 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 DYDC2Q96IM9 177 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 EXOC1Q9NV70 894 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 MYMKA6NI61 221 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 EIF3JO75822 258 aaKnown RBP14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 SLITRK3O94933 977 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 PLA2G4BP0C869 781 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 GRM1Q13255 1194 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 TERF2Q15554 542 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 CYP4F22Q6NT55 531 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 SMYD4Q8IYR2 804 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 ZNF446Q9NWS9 450 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 SAMM50Q9Y512 469 aa14.57□□□□□ -0.08
SQSTM1-201ENST00000360718 SYNRGQ9UMZ2 1314 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 ZBTB39O15060 712 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 SORBS3O60504 671 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 COBLO75128 1261 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 KRT76Q01546 638 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 PDE4DQ08499 809 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 EEPD1Q7L9B9 569 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 TPH2Q8IWU9 490 aa14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 GPR161Q8N6U8 529 aaKnown RBP14.56□□□□□ -0.08
SQSTM1-201ENST00000360718 SPATA31C2B4DYI2 1134 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 RHOBTB3O94955 611 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 STIM1Q13586 685 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 PTPN21Q16825 1174 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 SEPT14Q6ZU15 432 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 LRRN4CLQ8ND94 238 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 BANK1Q8NDB2 785 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 CCDC51Q96ER9 411 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 PVALEFA0A1B0GWK0 134 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 KRT18P05783 430 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 ADORA2AP29274 412 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 SFNP31947 248 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 JAK3P52333 1124 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 TAF3Q5VWG9 929 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 TOGARAM2Q6ZUX3 1019 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 DYMQ7RTS9 669 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 GPR142Q7Z601 462 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 ZNF784Q8NCA9 323 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 DDX12PQ92771 950 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 CCDC102AQ96A19 550 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 IVNS1ABPQ9Y6Y0 642 aa14.55□□□□□ -0.08
SQSTM1-201ENST00000360718 P4HBP07237 508 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 IDEP14735 1019 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 SLC12A3P55017 1021 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 INHBEP58166 350 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 PPP2R3AQ06190 1150 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 TUBB2AQ13885 445 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 CDKAL1Q5VV42 579 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 KLHL10Q6JEL2 608 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 GPBP1Q86WP2 473 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 CNGA4Q8IV77 575 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 ANKRD20A12PQ8NF67 263 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 PIGOQ8TEQ8 1089 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 NACC1Q96RE7 527 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 TUBB2BQ9BVA1 445 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 ZCCHC17Q9NP64 241 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 MRFAP1Q9Y605 127 aa14.54□□□□□ -0.08
SQSTM1-201ENST00000360718 FHOD1Q9Y613 1164 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms