RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 NOVA2Q9UNW9 492 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 CD2APQ9Y5K6 639 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 SLURP2P0DP57 97 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 PKN1Q16512 942 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 SCARA5Q6ZMJ2 495 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 REXO1L1PQ8IX06 675 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 TACO1Q9BSH4 297 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 PADI6Q6TGC4 694 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 PASD1Q8IV76 773 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 TTLL6Q8N841 843 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 APOL6Q9BWW8 343 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 RRP15Q9Y3B9 282 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 ATP8B1O43520 1251 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 SLC37A4O43826 429 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 HHATQ5VTY9 493 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 RNF169Q8NCN4 708 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 PPM1EQ8WY54 764 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 LRRC1Q9BTT6 524 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 FAM169AQ9Y6X4 670 aa15.29■□□□□ 0.04
PCMTD1-201ENST00000360540 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 LACTBP83111 547 aaPredicted RBP15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 PRAMEF18Q5VWM3 479 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 PTF1AQ7RTS3 328 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 SESTD1Q86VW0 696 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 HEMGNQ9BXL5 484 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 A0A087X0B3 334 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 IPO5O00410 1097 aaKnown RBP15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 ZBTB7AO95365 584 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 MFAP3P55082 362 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 DCAF15Q66K64 600 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 PDXDC2PQ6P474 469 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 HAUS1Q96CS2 278 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 MAD2L2Q9UI95 211 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 ZNF131P52739 623 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 LMBRD2Q68DH5 695 aaPredicted RBP15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 TAOK1Q7L7X3 1001 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 DNAAF5Q86Y56 855 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 CEP72Q9P209 647 aa15.28■□□□□ 0.04
PCMTD1-201ENST00000360540 ASNSP08243 561 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 SLC9A1P19634 815 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 CCDC93Q567U6 631 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 CACNA2D3Q8IZS8 1091 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 ATP6V0A1Q93050 837 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 JMJD4Q9H9V9 463 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 N4BP1O75113 896 aaKnown RBP15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 RHOBTB3O94955 611 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 MTMR1Q13613 665 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 KCNB1Q14721 858 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 DRAP1Q14919 205 aaPredicted RBP15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 SGO2Q562F6 1265 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 SPATA4Q8NEY3 305 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 ANKRD7Q92527 254 aa15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.04
PCMTD1-201ENST00000360540 DAPK3O43293 454 aa15.27■□□□□ 0.03
PCMTD1-201ENST00000360540 EXOC4Q96A65 974 aa15.27■□□□□ 0.03
PCMTD1-201ENST00000360540 NBPF3Q9H094 633 aa15.27■□□□□ 0.03
PCMTD1-201ENST00000360540 EIF3CLB5ME19 914 aaKnown RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 ACSL3O95573 720 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 ERVK-24P63145 666 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 AP3B2Q13367 1082 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 GIMAP8Q8ND71 665 aaPredicted RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 RNF34Q969K3 372 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 EIF3CQ99613 913 aaKnown RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 LXNQ9BS40 222 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 Q3C1V9 767 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 CYFIP1Q7L576 1253 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 MLXIPLQ9NP71 852 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 RAB20Q9NX57 234 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 POLLQ9UGP5 575 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 RIMS1Q86UR5 1692 aaKnown RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 SRGNP10124 158 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 CA8P35219 290 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 C16orf86Q6ZW13 317 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 ZBTB8OSQ8IWT0 167 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 RSAD2Q8WXG1 361 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 TSNARE1Q96NA8 513 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 TRIM7Q9C029 511 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 ZMYND12Q9H0C1 365 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 CTIFO43310 598 aaKnown RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 SP8Q8IXZ3 490 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 CCDC13Q8IYE1 715 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 THNSL1Q8IYQ7 743 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 THOC1Q96FV9 657 aaKnown RBP15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 FBXO28Q9NVF7 368 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
PCMTD1-201ENST00000360540 NEURL4Q96JN8 1562 aa15.25■□□□□ 0.03
PCMTD1-201ENST00000360540 CLTAP09496 248 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms