RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CACNA1FO60840 1977 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 ZFXP17010 805 aaPredicted RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 NEK9Q8TD19 979 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 HEXIM2Q96MH2 286 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 A0A0D9SFI3 127 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 KRT1P04264 644 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 SSH3Q8TE77 659 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 COPRSQ9NQ92 184 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 TRIM60Q495X7 471 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 ZNF263O14978 683 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 ARPP19P56211 112 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 ADCY2Q08462 1091 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 KLHL38Q2WGJ6 581 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 OTUD7AQ8TE49 926 aaPredicted RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 STAP1Q9ULZ2 295 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 KCNH4Q9UQ05 1017 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 EXOC1LA0A1B0GW35 172 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 GFAPP14136 432 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 KRT4P19013 534 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 PDIA3P30101 505 aaKnown RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 ACTR5Q9H9F9 607 aaPredicted RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 ZNF496Q96IT1 587 aaPredicted RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 A0A1B0GW55 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 GOLGA8JA6NMD2 632 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4L2P0CJ85 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4L3P0CJ86 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4L4P0CJ87 422 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4L5P0CJ88 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4L6P0CJ89 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4L7P0CJ90 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 PLS3P13797 630 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 RWDD2BP57060 319 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 MAP3K10Q02779 954 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 PATL1Q86TB9 770 aaKnown RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 IFT43Q96FT9 208 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 DUX4Q9UBX2 424 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 PEG3Q9GZU2 1588 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 RAP1GDS1P52306 607 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 ACBD5Q5T8D3 534 aaPredicted RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 C2orf40Q9H1Z8 148 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 LMBRD1Q9NUN5 540 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 MTMR6Q9Y217 621 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 LAMB3Q13751 1172 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 FDX1P10109 184 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 ZNF18P17022 549 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 TMEM179Q6ZVK1 233 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 MTRQ99707 1265 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 PODXLO00592 558 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 RHOT2Q8IXI1 618 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 RWDD2AQ9UIY3 292 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 FOXP2O15409 715 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 CALB1P05937 261 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 RBM41Q96IZ5 413 aaKnown RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 PITPNM3Q9BZ71 974 aa10.37□□□□□ -0.75
CUX1-203ENST00000360264 GCOM2Q9BZD3 368 aaPredicted RBP10.37□□□□□ -0.75
CUX1-203ENST00000360264 ORC2Q13416 577 aaPredicted RBP10.36□□□□□ -0.75
CUX1-203ENST00000360264 DSTYKQ6XUX3 929 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 ANKS3Q6ZW76 656 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 PIP4K2CQ8TBX8 421 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 MAN1A2O60476 641 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 COBLO75128 1261 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 BMP3P12645 472 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 MED21Q13503 144 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 CFAP36Q96G28 342 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 NR1H4Q96RI1 486 aaPredicted RBP10.36□□□□□ -0.75
CUX1-203ENST00000360264 EPB41L5Q9HCM4 733 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 FEM1BQ9UK73 627 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 CREB3O43889 395 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 LRRN2O75325 713 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 TRIM54Q9BYV2 358 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 GOLGA8IPA6NC78 632 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SDR42E1Q8WUS8 393 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 COG4Q9H9E3 785 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 RALAP11233 206 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 RCAN1P53805 252 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 KIF19Q2TAC6 998 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SZRD1Q7Z422 152 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 C2orf69Q8N8R5 385 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 CALN1Q9BXU9 219 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 KRT7P08729 469 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 PLA2G4BP0C869 781 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 NDUFA8P51970 172 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 PROM2Q8N271 834 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 TBC1D19Q8N5T2 526 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
CUX1-203ENST00000360264 MAPK13O15264 365 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
CUX1-203ENST00000360264 PRELPP51888 382 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 C7orf31Q8N865 590 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 STAMQ92783 540 aa10.36□□□□□ -0.75
CUX1-203ENST00000360264 PHKG2P15735 406 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms