RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 FRA10AC1Q70Z53 315 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 SZRD1Q7Z422 152 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 TRIM15Q9C019 465 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 SPATS2LQ9NUQ6 558 aaKnown RBP19.76■□□□□ 0.75
SHANK1-202ENST00000359082 ESRRAP11474 423 aaPredicted RBP19.76■□□□□ 0.75
SHANK1-202ENST00000359082 TUBB6Q9BUF5 446 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 NCLNQ969V3 563 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 KANSL2Q9H9L4 492 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 SCOCQ9UIL1 159 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 SLC8A2Q9UPR5 921 aa19.76■□□□□ 0.75
SHANK1-202ENST00000359082 HSPA4LO95757 839 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 GNL1P36915 607 aaPredicted RBP19.75■□□□□ 0.75
SHANK1-202ENST00000359082 MRPS25P82663 173 aaKnown RBP19.75■□□□□ 0.75
SHANK1-202ENST00000359082 SERPINI1Q99574 410 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 PARD6BQ9BYG5 372 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 MYO5CQ9NQX4 1742 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 ARMC9Q7Z3E5 817 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 POLE2P56282 527 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 CENPUQ71F23 418 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 HIPK4Q8NE63 616 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 OR6B3Q8NGW1 331 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 PI4K2BG5E9Z4 385 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 RAD17O75943 681 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 GAS2L3Q86XJ1 694 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 MOSPD1Q9UJG1 213 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 CAPN11Q9UMQ6 739 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 NEK9Q8TD19 979 aa19.75■□□□□ 0.75
SHANK1-202ENST00000359082 SERPINB2P05120 415 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 SLFN14P0C7P3 912 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 PI16Q6UXB8 463 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 ERICH1Q86X53 443 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 FMO2Q99518 471 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 hCG_1984214I3L0E3 225 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 ZNF713Q8N859 430 aaPredicted RBP19.74■□□□□ 0.75
SHANK1-202ENST00000359082 POLR3CQ9BUI4 534 aaPredicted RBP19.74■□□□□ 0.75
SHANK1-202ENST00000359082 SUFUQ9UMX1 484 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 ABCD1P33897 745 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 PDXDC2PQ6P474 469 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 SRRM1Q8IYB3 904 aaKnown RBP19.74■□□□□ 0.75
SHANK1-202ENST00000359082 PRAMEF22A3QJZ6 481 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 ARMCX2Q7L311 632 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 NDUFA10O95299 355 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 ESRRBO95718 433 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 KITP10721 976 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 NR1D1P20393 614 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 HADHAP40939 763 aa19.74■□□□□ 0.75
SHANK1-202ENST00000359082 GLE1Q53GS7 698 aaKnown RBP19.74■□□□□ 0.75
SHANK1-202ENST00000359082 F5H423 210 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-202ENST00000359082 PSMD2Q13200 908 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 LINC00301Q8NCQ3 95 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 GIPC2Q8TF65 315 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 EIF2AK2P19525 551 aaKnown RBP19.73■□□□□ 0.75
SHANK1-202ENST00000359082 TAC1P20366 129 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 NLGN1Q8N2Q7 840 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 MB21D1Q8N884 522 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 GPR101Q96P66 508 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-202ENST00000359082 SAYSD1Q9NPB0 183 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 ITM2BQ9Y287 266 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 SUPT20HL1Q3ZLR7 823 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 SNX19Q92543 992 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 MMTAG2Q9BU76 263 aaKnown RBP19.73■□□□□ 0.75
SHANK1-202ENST00000359082 COPRSQ9NQ92 184 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 PTPRTO14522 1441 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 PRPF3O43395 683 aaKnown RBP19.73■□□□□ 0.75
SHANK1-202ENST00000359082 KCNQ4P56696 695 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 CYP27A1Q02318 531 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 VSTM4Q8IW00 320 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
SHANK1-202ENST00000359082 TTC17Q96AE7 1141 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 NFU1Q9UMS0 254 aa19.73■□□□□ 0.75
SHANK1-202ENST00000359082 PEX3P56589 373 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 DRP2Q13474 957 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 CDHR1Q96JP9 859 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 PLAAQ9Y263 795 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 ATP8B1O43520 1251 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 POLIQ9UNA4 740 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 ELF1P32519 619 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 SRPRBQ9Y5M8 271 aaKnown RBP19.72■□□□□ 0.75
SHANK1-202ENST00000359082 CCDC195A0A1B0GUA6 201 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 PAMP19021 973 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 PASD1Q8IV76 773 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 EIF2AQ9BY44 585 aaKnown RBP19.72■□□□□ 0.75
SHANK1-202ENST00000359082 SERPINB13Q9UIV8 391 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 ZBED6P86452 979 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 FAM49AQ9H0Q0 323 aaPredicted RBP19.72■□□□□ 0.75
SHANK1-202ENST00000359082 NDST4Q9H3R1 872 aa19.72■□□□□ 0.75
SHANK1-202ENST00000359082 A0A0G2JND7 137 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 MAPK13O15264 365 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 RWDD2BP57060 319 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 GRAMD1BQ3KR37 738 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 CRLF3Q8IUI8 442 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 GOLGA8MH3BSY2 632 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 CA4P22748 312 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 ATP6V1E1P36543 226 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 MECOMQ03112 1051 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 ZNF394Q53GI3 561 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 GPR108Q9NPR9 543 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 HSPA6P17066 643 aa19.71■□□□□ 0.75
SHANK1-202ENST00000359082 SURF1Q15526 300 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms