RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ODF2LQ9ULJ1 636 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 LRRC53A6NM62 1247 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 NFIBO00712 420 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 VCAM1P19320 739 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 VAV2P52735 878 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 TUBB4BP68371 445 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 SPA17Q15506 151 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 NFIL3Q16649 462 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 PCNX4Q63HM2 1172 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 SAMD7Q7Z3H4 446 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 CACNA2D4Q7Z3S7 1137 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 APOBEC3FQ8IUX4 373 aaKnown RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 ARGLU1Q9NWB6 273 aaPredicted RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 MYH11P35749 1972 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ASTN1O14525 1302 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ZNF541Q9H0D2 1346 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 FLOT1O75955 427 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 GCNT3O95395 438 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 LCA5LO95447 670 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ALAS1P13196 640 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ITGB5P18084 799 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 HOXD13P35453 343 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 EPS15P42566 896 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ZNF131P52739 623 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 MTMR2Q13614 643 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 WHAMMP3Q1A5X7 153 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 TBC1D10BQ4KMP7 808 aaPredicted RBP16.4■□□□□ 0.22
GABPB1-202ENST00000359031 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 RRAGAQ7L523 313 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 TXLNBQ8N3L3 684 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 PIGOQ8TEQ8 1089 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
GABPB1-202ENST00000359031 RABGGTAQ92696 567 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
GABPB1-202ENST00000359031 PARVGQ9HBI0 331 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 METTL14Q9HCE5 456 aaKnown RBP16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 GUCA1BQ9UMX6 200 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
GABPB1-202ENST00000359031 UBIAD1Q9Y5Z9 338 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
GABPB1-202ENST00000359031 ASTN2O75129 1339 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 SSU72P8A0A1W2PR75 194 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 ZBED4O75132 1171 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 ABL1P00519 1130 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 GUCY2CP25092 1073 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 EPHX2P34913 555 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 GPR161Q8N6U8 529 aaKnown RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 SYTL5Q8TDW5 730 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 PURBQ96QR8 312 aaKnown RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 LXNQ9BS40 222 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 RPAP3Q9H6T3 665 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 RAVER2Q9HCJ3 691 aaKnown RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 JADE2Q9NQC1 790 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 ARHGAP20Q9P2F6 1191 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 ARMCX3Q9UH62 379 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 ABT1Q9ULW3 272 aaKnown RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 COL11A1P12107 1806 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-202ENST00000359031 SCN4AP35499 1836 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 RLFQ13129 1914 aa16.39■□□□□ 0.21
GABPB1-202ENST00000359031 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 NR3C1P04150 777 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 KIF11P52732 1056 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 CHMP4BP1P59074 171 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 AMPD2Q01433 879 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 TKFCQ3LXA3 575 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
GABPB1-202ENST00000359031 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 DEF6Q9H4E7 631 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
GABPB1-202ENST00000359031 KCNH7Q9NS40 1196 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 TRIM10Q9UDY6 481 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 ZMYM2Q9UBW7 1377 aa16.38■□□□□ 0.21
GABPB1-202ENST00000359031 ARHGEF35A5YM69 484 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 NOL4O94818 638 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 AFPP02771 609 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 EPB41P11171 864 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 KIF5AQ12840 1032 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 DEFB115Q30KQ5 88 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 SLC30A10Q6XR72 485 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms