RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ZBTB48P10074 688 aaPredicted RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 ERVK-9P63128 1117 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 PPP2R5EQ16537 467 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 KNOP1Q1ED39 458 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 BMT2Q1RMZ1 405 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 ALKBH5Q6P6C2 394 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 ZNF571Q7Z3V5 609 aaPredicted RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 LRRC47Q8N1G4 583 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 CCDC26Q8TAB7 109 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 MYCBPAPQ8TBZ2 947 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 SEC14L1Q92503 715 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 KAT2BQ92831 832 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 FGFBP2Q9BYJ0 223 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 DHX36Q9H2U1 1008 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 GPCPD1Q9NPB8 672 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 TTC7AQ9ULT0 858 aaPredicted RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 H0YGN5 161 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 XRCC5P13010 732 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 RPL13P26373 211 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 HSD17B3P37058 310 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 GUCY1A3Q02108 690 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 ARID5AQ03989 594 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 AP3B2Q13367 1082 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 HLTFQ14527 1009 aaKnown RBP eCLIP19.35■□□□□ 0.691e-8■■□□□ 13
RTN4-204ENST00000357732 EPM2AIP1Q7L775 607 aaPredicted RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 CLEC10AQ8IUN9 316 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 CERKQ8TCT0 537 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 CCT8L2Q96SF2 557 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 PACSIN2Q9UNF0 486 aaPredicted RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 DAAM1Q9Y4D1 1078 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 NFS1Q9Y697 457 aa19.35■□□□□ 0.69
RTN4-204ENST00000357732 GREB1LQ9C091 1923 aaPredicted RBP19.34■□□□□ 0.69
RTN4-204ENST00000357732 FNTAP49354 379 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 CLUL1Q15846 466 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 KLHL7Q8IXQ5 586 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 TPCN2Q8NHX9 752 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 POTEB3A0JP26 581 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 POTECB2RU33 542 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 AKR1B1P15121 316 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 PON1P27169 355 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 HNRNPH1P31943 449 aaKnown RBP19.34■□□□□ 0.69
RTN4-204ENST00000357732 POTEBQ6S5H4 581 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 GPIHBP1Q8IV16 184 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
RTN4-204ENST00000357732 SART1O43290 800 aaKnown RBP19.33■□□□□ 0.69
RTN4-204ENST00000357732 CEP104O60308 925 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 PAEPP09466 180 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 H2AFZP0C0S5 128 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 JAM2P57087 298 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 SETQ01105 290 aaPredicted RBP19.33■□□□□ 0.69
RTN4-204ENST00000357732 PICALMQ13492 652 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 ARSHQ5FYA8 562 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 H2AFVQ71UI9 128 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 FAM114A2Q9NRY5 505 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 TYW1Q9NV66 732 aaKnown RBP19.33■□□□□ 0.69
RTN4-204ENST00000357732 STXBP5LQ9Y2K9 1186 aa19.33■□□□□ 0.69
RTN4-204ENST00000357732 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.69
RTN4-204ENST00000357732 FERP16591 822 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 DNA2P51530 1060 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 DDR1Q08345 913 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 DPP8Q6V1X1 898 aaPredicted RBP19.33■□□□□ 0.68
RTN4-204ENST00000357732 SYT2Q8N9I0 419 aaPredicted RBP19.33■□□□□ 0.68
RTN4-204ENST00000357732 CABS1Q96KC9 395 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 POLLQ9UGP5 575 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 SERPINB13Q9UIV8 391 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 DAGLAQ9Y4D2 1042 aa19.33■□□□□ 0.68
RTN4-204ENST00000357732 QSER1Q2KHR3 1735 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 RPA1P27694 616 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 CTNNA1P35221 906 aaKnown RBP19.32■□□□□ 0.68
RTN4-204ENST00000357732 EPHA7Q15375 998 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 CRY2Q49AN0 593 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 PEX26Q7Z412 305 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 SLC12A6Q9UHW9 1150 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 GIT2Q14161 759 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 NFIL3Q16649 462 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 METTL13Q8N6R0 699 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 RABEP2Q9H5N1 569 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 ACTR5Q9H9F9 607 aaPredicted RBP19.32■□□□□ 0.68
RTN4-204ENST00000357732 A1CFQ9NQ94 594 aaKnown RBP19.32■□□□□ 0.68
RTN4-204ENST00000357732 DNM3Q9UQ16 869 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 CAPN7Q9Y6W3 813 aa19.32■□□□□ 0.68
RTN4-204ENST00000357732 KRIT1O00522 736 aa19.31■□□□□ 0.68
RTN4-204ENST00000357732 SLC9A1P19634 815 aa19.31■□□□□ 0.68
RTN4-204ENST00000357732 EIF3BP55884 814 aaKnown RBP19.31■□□□□ 0.68
RTN4-204ENST00000357732 ZNF844Q08AG5 666 aa19.31■□□□□ 0.68
RTN4-204ENST00000357732 C6orf89Q6UWU4 347 aa19.31■□□□□ 0.68
RTN4-204ENST00000357732 P3H4Q92791 437 aa19.31■□□□□ 0.68
RTN4-204ENST00000357732 GJA10Q969M2 543 aa19.31■□□□□ 0.68
RTN4-204ENST00000357732 H0YHG0 523 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 MED24O75448 989 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 CDR1P51861 262 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 UAP1Q16222 522 aaPredicted RBP19.3■□□□□ 0.68
RTN4-204ENST00000357732 Q4G0T1 1027 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 TBC1D16Q8TBP0 767 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 HES6Q96HZ4 224 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 CCDC17Q96LX7 622 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 ANO3Q9BYT9 981 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms