RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SLC30A5Q8TAD4 765 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 VPS11Q9H270 941 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 IL16Q14005 1332 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ETFBP38117 255 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ARHGAP18Q8N392 663 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 PBXIP1Q96AQ6 731 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 RIC8AQ9NPQ8 531 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 PYCARDQ9ULZ3 195 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 USP20Q9Y2K6 914 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 NCOA1Q15788 1441 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 MTMR2Q13614 643 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 SPOPLQ6IQ16 392 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 C1orf131Q8NDD1 294 aaKnown RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 PPHLN1Q8NEY8 458 aaKnown RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 OR8K1Q8NGG5 319 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 PIP4K2CQ8TBX8 421 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 SNX19Q92543 992 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ASIC4Q96FT7 647 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 EDEM3Q9BZQ6 932 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ADAMTS1Q9UHI8 967 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 NOC2LQ9Y3T9 749 aaKnown RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 SAR1BQ9Y6B6 198 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 S100BP04271 92 aaPredicted RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 PLCG1P19174 1290 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 GRAPQ13588 217 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 SGO2Q562F6 1265 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 GRAPLQ8TC17 118 aaPredicted RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 KLHL8Q9P2G9 620 aaPredicted RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ZSCAN9O15535 394 aaPredicted RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 DHX9Q08211 1270 aaKnown RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 SCARF1Q14162 830 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 LRRC14Q15048 493 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 KIF12Q96FN5 646 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 TESK2Q96S53 571 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 DSCC1Q9BVC3 393 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 TRIM10Q9UDY6 481 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 BAG5Q9UL15 447 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 DNAJC6O75061 913 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 CPP00450 1065 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ARL4AP40617 200 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 CENPAP49450 140 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 BRD1O95696 1058 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 PMLP29590 882 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 DPCR1Q3MIW9 517 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 C2CD6Q53TS8 623 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ZC3H18Q86VM9 953 aaKnown RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 DNAAF5Q86Y56 855 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 FOXP4Q8IVH2 680 aaPredicted RBP7.93□□□□□ -1.14
VPS13A-202ENST00000357409 VMP1Q96GC9 406 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 LRGUKQ96M69 825 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 ACCSQ96QU6 501 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 RNF123Q5XPI4 1314 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 RAD50Q92878 1312 aa7.93□□□□□ -1.14
VPS13A-202ENST00000357409 RRP9O43818 475 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 UBE3AQ05086 875 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 DRP2Q13474 957 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 ARHGEF6Q15052 776 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 FOXR1Q6PIV2 292 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TAS2R42Q7RTR8 314 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 MICALL2Q8IY33 904 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 EFCAB8A8MWE9 144 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TDP2O95551 362 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 ASPHQ12797 758 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 SPON1Q9HCB6 807 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 PTPRKQ15262 1439 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 GOLGA8RI6L899 631 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 PRR29P0C7W0 189 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 OCM2P0CE71 109 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 OCMP0CE72 109 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 AFPP02771 609 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 H2AFZP0C0S5 128 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 DDX5P17844 614 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 RASGRF1Q13972 1273 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 LBRQ14739 615 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 ANKRD40Q6AI12 368 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 H2AFVQ71UI9 128 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 XAB2Q9HCS7 855 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 LMBRD1Q9NUN5 540 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 SLC8A2Q9UPR5 921 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 CASQ2O14958 399 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 CASS4Q9NQ75 786 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 RNF146Q9NTX7 359 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 CPA4Q9UI42 421 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TLK1Q9UKI8 766 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 ZNF215Q9UL58 517 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 ATP11BQ9Y2G3 1177 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 SLURP2P0DP57 97 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TXNP10599 105 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 C11orf57Q6ZUT1 292 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 FRA10AC1Q70Z53 315 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 RD3Q7Z3Z2 195 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 SRGAP1Q7Z6B7 1085 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TTLL11Q8NHH1 800 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 RMDN1Q96DB5 314 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 PTPRHQ9HD43 1115 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 WDR64B1ANS9 1081 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TAOK1Q7L7X3 1001 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms