RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 LBX2Q6XYB7 198 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 CYP2W1Q8TAV3 490 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 SMCR8Q8TEV9 937 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 STAMQ92783 540 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 GLT8D2Q9H1C3 349 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 COBLO75128 1261 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 OSBPP22059 807 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 ARHGAP4P98171 946 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 KCNB1Q14721 858 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 DNAJC21Q5F1R6 531 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 WDR78Q5VTH9 848 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 RNF207Q6ZRF8 634 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 NCAPG2Q86XI2 1143 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 PTPN18Q99952 460 aa13.98□□□□□ -0.17
RTFDC1-202ENST00000357348 A0A087WUV0 522 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 PIK3CDO00329 1044 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 KRT86O43790 486 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 FDX1P10109 184 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 LONP1P36776 959 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 TXKP42681 527 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 CDK17Q00537 523 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 AP3B2Q13367 1082 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 CCDC122Q5T0U0 273 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 RASAL3Q86YV0 1011 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 MMGT1Q8N4V1 131 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 C4orf32Q8N8J7 132 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 AENQ8WTP8 325 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 FAM107BQ9H098 131 aa13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 DDX25Q9UHL0 483 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-202ENST00000357348 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 ENC1O14682 589 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 TOMM70O94826 608 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 ZNF76P36508 570 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 GGCXP38435 758 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 MCF2L2Q86YR7 1114 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 NOC3LQ8WTT2 800 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 JAKMIP2Q96AA8 810 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 SELENOOQ9BVL4 669 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 SPATC1LQ9H0A9 340 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 RBPJLQ9UBG7 517 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 RBBP6Q7Z6E9 1792 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 MYPNQ86TC9 1320 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 PP2D1A8MPX8 630 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 FAM86B1E9PN63 330 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 CNMDO75829 334 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 MYL1P05976 194 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 FAM86B2P0C5J1 330 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 MYBL2P10244 700 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 CYLC1P35663 651 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 DNM2P50570 870 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.173e-10■■■■□ 25.4
RTFDC1-202ENST00000357348 PRR16Q569H4 304 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 ANKRD13CQ8N6S4 541 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 ZNF784Q8NCA9 323 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 SH3GL2Q99962 352 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 NUP58Q9BVL2 599 aa13.96□□□□□ -0.17
RTFDC1-202ENST00000357348 RCCD1A6NED2 376 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 PDE2AO00408 941 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 MARCH6O60337 910 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 SRGAP2O75044 1071 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 FOSP01100 380 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 PRLRP16471 622 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 TECP42680 631 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 HSD17B4P51659 736 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 OAZ1P54368 228 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 PDE4CQ08493 712 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 CALCRLQ16602 461 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 FIGNQ5HY92 759 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 IL31RAQ8NI17 732 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 MOV10L1Q9BXT6 1211 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 FAM184BQ9ULE4 1060 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 JRKLQ9Y4A0 524 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 KLRC4O43908 158 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 ERCC3P19447 782 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 SREBF1P36956 1147 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 IQCEQ6IPM2 695 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 ANKRD35Q8N283 1001 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 FAM76AQ8TAV0 307 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 LACRTQ9GZZ8 138 aa13.95□□□□□ -0.18
RTFDC1-202ENST00000357348 A0A0G2JMZ2 1700 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms