RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 ANKLE1Q8NAG6 615 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 LRRC8CQ8TDW0 803 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 EPS8L3Q8TE67 593 aaKnown RBP17.16■□□□□ 0.34
CDK16-202ENST00000357227 DYDC2Q96IM9 177 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 PLIN2Q99541 437 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
CDK16-202ENST00000357227 ATP8A2Q9NTI2 1148 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 DBR1Q9UK59 544 aaKnown RBP17.16■□□□□ 0.34
CDK16-202ENST00000357227 E7ENQ6 273 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 AFPP02771 609 aaKnown RBP17.16■□□□□ 0.34
CDK16-202ENST00000357227 MGAT5Q09328 741 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 EXOC3L1Q86VI1 746 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 SCG3Q8WXD2 468 aaKnown RBP17.16■□□□□ 0.34
CDK16-202ENST00000357227 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■■■■■ 36.1
CDK16-202ENST00000357227 TIPINQ9BVW5 301 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 NWD2Q9ULI1 1742 aa17.16■□□□□ 0.34
CDK16-202ENST00000357227 SKIP12755 728 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
CDK16-202ENST00000357227 CDK17Q00537 523 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 SPATA16Q9BXB7 569 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 NLRC4Q9NPP4 1024 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
CDK16-202ENST00000357227 LRRC37A3O60309 1634 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 CNGA2Q16280 664 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 MEI1Q5TIA1 1274 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 PDXDC2PQ6P474 469 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 TRIM22Q8IYM9 498 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
CDK16-202ENST00000357227 AZIN2Q96A70 460 aa17.15■□□□□ 0.34
CDK16-202ENST00000357227 KRIT1O00522 736 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 PLOD1Q02809 727 aaPredicted RBP17.14■□□□□ 0.34
CDK16-202ENST00000357227 CCDC15Q0P6D6 951 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 TMED1Q13445 227 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 INF2Q27J81 1249 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 CERKLQ49MI3 558 aaPredicted RBP17.14■□□□□ 0.34
CDK16-202ENST00000357227 CMPK2Q5EBM0 449 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 SNX30Q5VWJ9 437 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 FMO2Q99518 471 aa17.14■□□□□ 0.34
CDK16-202ENST00000357227 DENND2DQ9H6A0 471 aaPredicted RBP17.14■□□□□ 0.34
CDK16-202ENST00000357227 ARID5AQ03989 594 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.339e-7■■■■□ 25.2
CDK16-202ENST00000357227 RINLQ6ZS11 566 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 DNAAF5Q86Y56 855 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 DNAJC1Q96KC8 554 aaKnown RBP17.14■□□□□ 0.33
CDK16-202ENST00000357227 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.14■□□□□ 0.331e-6■■□□□ 12.3
CDK16-202ENST00000357227 PACSIN1Q9BY11 444 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 SPATA7Q9P0W8 599 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 TUBGCP4Q9UGJ1 667 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 A0A087WZG4 1122 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 FOXO6A8MYZ6 492 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 PSMA7O14818 248 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 PJA2O43164 708 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 CCNB1P14635 433 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 KBTBD12Q3ZCT8 623 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 DENND2CQ68D51 928 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 INTS8Q75QN2 995 aaKnown RBP17.14■□□□□ 0.33
CDK16-202ENST00000357227 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 TBC1D16Q8TBP0 767 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 WASF1Q92558 559 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
CDK16-202ENST00000357227 MAGEA13PA6NCF6 341 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
CDK16-202ENST00000357227 VHLP40337 213 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
CDK16-202ENST00000357227 GCKRQ14397 625 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 RPS6KA1Q15418 735 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 DTX3LQ8TDB6 740 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 SLC35B4Q969S0 331 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
CDK16-202ENST00000357227 FAM192AQ9GZU8 254 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 MYLK2Q9H1R3 596 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 MED1Q15648 1581 aaPredicted RBP17.13■□□□□ 0.33
CDK16-202ENST00000357227 TMEM221A6NGB7 291 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 A6NJR5 290 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 CREB1P16220 341 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 RTP1P59025 263 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 SETDB1Q15047 1291 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 MIIPQ5JXC2 388 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 ECHDC2Q86YB7 292 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 C17orf50Q8WW18 174 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 ERP27Q96DN0 273 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 AGBL1Q96MI9 1066 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
CDK16-202ENST00000357227 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDK16-202ENST00000357227 KLHL14Q9P2G3 628 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 TMEM59LQ9UK28 342 aa17.13■□□□□ 0.33
CDK16-202ENST00000357227 PAIP2BQ9ULR5 123 aaKnown RBP17.13■□□□□ 0.33
CDK16-202ENST00000357227 DIP2AQ14689 1571 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms