RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 GPBP1L1Q9HC44 474 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 NXF1Q9UBU9 619 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SALL3Q9BXA9 1300 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 UGGT1Q9NYU2 1555 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ZBED1O96006 694 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 OCM2P0CE71 109 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 OCMP0CE72 109 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 NT5C2P49902 561 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 DYNLT1P63172 113 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 NSUN2Q08J23 767 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 EEPD1Q7L9B9 569 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ZBTB9Q96C00 473 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 LRRC37BQ96QE4 947 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PIGSQ96S52 555 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 DDX50Q9BQ39 737 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SUFUQ9UMX1 484 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SUGT1Q9Y2Z0 365 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 LDHAP00338 332 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 GRAPQ13588 217 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 GRAPLQ8TC17 118 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 CENPKQ9BS16 269 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 HUS1O60921 280 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 USP17L8P0C7I0 530 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 CD58P19256 250 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ARL4DP49703 201 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 SESN3P58005 492 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 MESDQ14696 234 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PDXDC2PQ6P474 469 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 UNC5CLQ8IV45 518 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ACAP3Q96P50 834 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 INPP5FQ9Y2H2 1132 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 LRRD1A4D1F6 860 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 CMA1P23946 247 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 OSTNP61366 133 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 RAD51Q06609 339 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TTLL4Q14679 1199 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 CMTR1Q8N1G2 835 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 AFG1LQ8WV93 481 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 KIFC3Q9BVG8 833 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 INO80Q9ULG1 1556 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 ADKP55263 362 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 RCN2Q14257 317 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 TMED2Q15363 201 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 GLE1Q53GS7 698 aaKnown RBP5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PCGF5Q86SE9 256 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 CALN1Q9BXU9 219 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 MAGEB5Q9BZ81 275 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 COA1Q9GZY4 146 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 PLEKHA4Q9H4M7 779 aa5.95□□□□□ -1.46
PTPRD-202ENST00000356435 RFX7Q2KHR2 1363 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 HSPD1P10809 573 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 OAS2P29728 719 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TWF2Q6IBS0 349 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 BEST2Q8NFU1 509 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 OR6B3Q8NGW1 331 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 RNF26Q9BY78 433 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PARVGQ9HBI0 331 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PRDM5Q9NQX1 630 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 HOXC10Q9NYD6 342 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 FEM1BQ9UK73 627 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 FAF1Q9UNN5 650 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 FIS1Q9Y3D6 152 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PLEKHG2Q9H7P9 1386 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 KBTBD13C9JR72 458 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 JAK2O60674 1132 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MYO1DO94832 1006 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MXI1P50539 228 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 CLCN6P51797 869 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 AP3B2Q13367 1082 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 VEPH1Q14D04 833 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 C10orf76Q5T2E6 689 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 EXT2Q93063 718 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 OTUB1Q96FW1 271 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 LBHD1Q9BQE6 289 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 XPO4Q9C0E2 1151 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 LSG1Q9H089 658 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 SYNDIG1Q9H7V2 258 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 GPR108Q9NPR9 543 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 STX18Q9P2W9 335 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 ABCA6Q8N139 1617 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PNMA6EA0A0J9YXQ4 647 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PSMA2P25787 234 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 HADHAP40939 763 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF667Q5HYK9 610 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 ZBTB41Q5SVQ8 909 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TTC23LQ6PF05 361 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TTC39CQ8N584 583 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 HNRNPLLQ8WVV9 542 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MTBPQ96DY7 904 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TSSK1BQ9BXA7 367 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 KLC2Q9H0B6 622 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 GREM2Q9H772 168 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 UBN2Q6ZU65 1347 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PNMA6FA0A0J9YX94 578 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 CREB3O43889 395 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TOM1L1O75674 476 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MX2P20592 715 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 GNGT1P63211 74 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms