RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KLC4Q9NSK0 619 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 CHCHD3Q9NX63 227 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 GGT7Q9UJ14 662 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 MEIS1O00470 390 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 ZSCAN9O15535 394 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 CTIFO43310 598 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 KRT33BQ14525 404 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 LRRC8EQ6NSJ5 796 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 ANO5Q75V66 913 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 MAST3O60307 1309 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 DIAPH2O60879 1101 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 ARL4AP40617 200 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 LRRC14Q15048 493 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 SMAD1Q15797 465 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 SNX25Q9H3E2 840 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 USP40Q9NVE5 1235 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 KCNG1Q9UIX4 513 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 PALMO75781 387 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 KRT8P05787 483 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 PABPC4Q13310 644 aaKnown RBP eCLIP11.83□□□□□ -0.525e-6■■■■■ 27.5
GTF3C1-201ENST00000356183 SCARA5Q6ZMJ2 495 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 IFNL3Q8IZI9 196 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 APOA1P02647 267 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 OCM2P0CE71 109 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 OCMP0CE72 109 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 BPIFB4P59827 614 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 BBS5Q8N3I7 341 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 FAM149B1Q96BN6 582 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 ADNPQ9H2P0 1102 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 STOML1Q9UBI4 398 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 PCDHA5Q9Y5H7 936 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 KIAA0232Q92628 1395 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 MROH5Q6ZUA9 1318 aa11.83□□□□□ -0.52
GTF3C1-201ENST00000356183 CARMIL3Q8ND23 1372 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 PPP6R2O75170 966 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 IMPG1Q17R60 797 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 PRPSAP2O60256 369 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 CD58P19256 250 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 PTPREP23469 700 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 ARHGAP18Q8N392 663 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 RASGRP4Q8TDF6 673 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 LRRC37BQ96QE4 947 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 SUN2Q9UH99 717 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 HAUS5O94927 633 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 IL13P35225 146 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 EDEM3Q9BZQ6 932 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 PNMA2Q9UL42 364 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 TRIM33Q9UPN9 1127 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 WDR47O94967 919 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 AOC3Q16853 763 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 CEP78Q5JTW2 689 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 EYA1Q99502 592 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 MTRQ99707 1265 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 FGGP02679 453 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 PDIA3P30101 505 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 NBPF9Q3BBW0 867 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 TAF1BQ53T94 588 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 FBXO11Q86XK2 927 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 WDR75Q8IWA0 830 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 DHTKD1Q96HY7 919 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 USP17L21D6R901 530 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 ZNF18P17022 549 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 CYP27A1Q02318 531 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 ADCK5Q3MIX3 580 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 C7orf31Q8N865 590 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 LARP4BQ92615 738 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 RWDD2AQ9UIY3 292 aa11.82□□□□□ -0.52
GTF3C1-201ENST00000356183 TMEM247A6NEH6 219 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 HNRNPDLO14979 420 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 SNX2O60749 519 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 ZBED1O96006 694 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 MCF2L2Q86YR7 1114 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.81□□□□□ -0.523e-6■■■■□ 23.5
GTF3C1-201ENST00000356183 SH3GL2Q99962 352 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 TEX12Q9BXU0 123 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 PCDH11XQ9BZA7 1347 aa11.81□□□□□ -0.52
GTF3C1-201ENST00000356183 PCDH11YQ9BZA8 1340 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms