RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 RGPD2P0DJD1 1756 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 F5H6K3 240 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 CALUO43852 315 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-202ENST00000355815 KLRC3Q07444 240 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 FYB2Q5VWT5 728 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 CCDC62Q6P9F0 684 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 SDCCAG8Q86SQ7 713 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-202ENST00000355815 GDAP1Q8TB36 358 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 MS4A14Q96JA4 679 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 RNF225M0QZC1 329 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-202ENST00000355815 ZBTB5O15062 677 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.04
SREBF1-202ENST00000355815 COASYQ13057 564 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 UNC13DQ70J99 1090 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 SFR1Q86XK3 245 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 CUEDC2Q9H467 287 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 KLC4Q9NSK0 619 aa15.27■□□□□ 0.04
SREBF1-202ENST00000355815 ARHGAP42A6NI28 874 aa15.27■□□□□ 0.03
SREBF1-202ENST00000355815 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.03
SREBF1-202ENST00000355815 FLOT1O75955 427 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 BMP3P12645 472 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 ACTN1P12814 892 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 STAT1P42224 750 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
SREBF1-202ENST00000355815 PNKPQ96T60 521 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 BIRC3Q13489 604 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 IL17AQ16552 155 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 PDXDC2PQ6P474 469 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 CCSER1Q9C0I3 900 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 VPS37BQ9H9H4 285 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 STK17AQ9UEE5 414 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 AFF2P51816 1311 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 HNRNPH1P31943 449 aaKnown RBP15.26■□□□□ 0.03
SREBF1-202ENST00000355815 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
SREBF1-202ENST00000355815 AOC3Q16853 763 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 CFAP157Q5JU67 520 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 COG1Q8WTW3 980 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 H3BQF6 201 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 SUN1O94901 812 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 RILPQ96NA2 401 aa15.26■□□□□ 0.03
SREBF1-202ENST00000355815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.26■□□□□ 0.035e-6■■■□□ 15.4
SREBF1-202ENST00000355815 SKAP2O75563 359 aaPredicted RBP15.25■□□□□ 0.03
SREBF1-202ENST00000355815 ATP5DP30049 168 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 GLIS3Q8NEA6 775 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 MORC4Q8TE76 937 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 RAD54LQ92698 747 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 SYNCQ9H7C4 482 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 TSKSQ9UJT2 592 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 KRT14P02533 472 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
SREBF1-202ENST00000355815 ELF1P32519 619 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 BEND6Q5SZJ8 279 aaPredicted RBP15.25■□□□□ 0.03
SREBF1-202ENST00000355815 KRT27Q7Z3Y8 459 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
SREBF1-202ENST00000355815 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 COA1Q9GZY4 146 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 VCX3BQ9H321 246 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 KDM3AQ9Y4C1 1321 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 GOLGA8IPA6NC78 632 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 GOLGA8JA6NMD2 632 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
SREBF1-202ENST00000355815 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 CCDC17Q96LX7 622 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 RAB17Q9H0T7 212 aa15.25■□□□□ 0.03
SREBF1-202ENST00000355815 PALMO75781 387 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 KCNH2Q12809 1159 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 PPP1R21Q6ZMI0 780 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 ZNF384Q8TF68 577 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 FAM208AQ9UK61 1670 aaKnown RBP15.24■□□□□ 0.03
SREBF1-202ENST00000355815 CCDC13Q8IYE1 715 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 GIMAP8Q8ND71 665 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-202ENST00000355815 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-202ENST00000355815 HAUS2Q9NVX0 235 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 ZNF446Q9NWS9 450 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 CAPN11Q9UMQ6 739 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 KDM4FA0A1W2PPD8 638 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 K7ENM7 598 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 RHOBTB3O94955 611 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 RANBP1P43487 201 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 FUT8Q9BYC5 575 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 ZMYND12Q9H0C1 365 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 HSD3B7Q9H2F3 369 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 TRPC5Q9UL62 973 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-202ENST00000355815 XRN1Q8IZH2 1706 aaKnown RBP15.24■□□□□ 0.03
SREBF1-202ENST00000355815 FMN2Q9NZ56 1722 aa15.24■□□□□ 0.03
SREBF1-202ENST00000355815 POC1B-GALNT4F8VUJ3 575 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms