RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 NACAP1Q9BZK3 213 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 GLTPD2A6NH11 291 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 LIN7AO14910 233 aaPredicted RBP11.83□□□□□ -0.52
SND1-201ENST00000354725 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 CASP14P31944 242 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 CLCN2P51788 898 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 TMED1Q13445 227 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 GRIK5Q16478 980 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
SND1-201ENST00000354725 RMDN2Q96LZ7 410 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 TTYH3Q9C0H2 523 aa11.83□□□□□ -0.52
SND1-201ENST00000354725 C6orf229H3BNL8 230 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 SMIM22K7EJ46 135 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 WHAMMP3Q1A5X7 153 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 TMTC1Q8IUR5 882 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 FUKQ8N0W3 1084 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 GABPB2Q8TAK5 448 aaPredicted RBP11.82□□□□□ -0.52
SND1-201ENST00000354725 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
SND1-201ENST00000354725 ZKSCAN3Q9BRR0 538 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 PSMD14O00487 310 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 ORC4O43929 436 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 ZNF280AP59817 542 aaPredicted RBP11.82□□□□□ -0.52
SND1-201ENST00000354725 MEA1Q16626 185 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 TRAPPC11Q7Z392 1133 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 BEGAINQ9BUH8 593 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 TCEAL9Q9UHQ7 104 aa11.82□□□□□ -0.52
SND1-201ENST00000354725 A6NHS1 94 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 SSBP05455 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
SND1-201ENST00000354725 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 PPFIA1Q13136 1202 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 TCP11X2Q5H9J9 407 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 ARL6IP4Q66PJ3 421 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 FAM76AQ8TAV0 307 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 SPATA17Q96L03 361 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 TBK1Q9UHD2 729 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 GRIN2DO15399 1336 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 A0A1W2PQC6 194 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 SMIM24O75264 130 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 TPPPO94811 219 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 PLEKHA8P1O95397 391 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 ESR2Q92731 530 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 ERP27Q96DN0 273 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 PYM1Q9BRP8 204 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 CAPS2Q9BXY5 557 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 VIPAS39Q9H9C1 493 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 GINM1Q9NU53 330 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 VPS54Q9P1Q0 977 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 ADAMTS3O15072 1205 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 TUBBP07437 444 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 CALM1P0DP23 149 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 CALM2P0DP24 149 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 CALM3P0DP25 149 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 CASP1P29466 404 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 TRPC1P48995 793 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.523e-8■■□□□ 14.5
SND1-201ENST00000354725 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.81□□□□□ -0.52
SND1-201ENST00000354725 ZNF804AQ7Z570 1209 aa11.81□□□□□ -0.52
SND1-201ENST00000354725 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
SND1-201ENST00000354725 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 POLR2AP24928 1970 aaKnown RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 KLRC4O43908 158 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 KCTD2Q14681 263 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 KBTBD12Q3ZCT8 623 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 WDR59Q6PJI9 974 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 ZNF572Q7Z3I7 529 aaPredicted RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 NUP58Q9BVL2 599 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 MXD3Q9BW11 206 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 ROBO3Q96MS0 1386 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 USP17L3A6NCW0 530 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 USP17L4A6NCW7 530 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 CDC25CP30307 473 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 COPB1P53618 953 aaKnown RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 MYO1EQ12965 1108 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 TTC38Q5R3I4 469 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 RNF187Q5TA31 235 aaPredicted RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 PAPD7Q5XG87 772 aaKnown RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 USP17L1Q7RTZ2 530 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms