RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 DENND2CQ68D51 928 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 SPATA31D4Q6ZUB0 917 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 ZC3H18Q86VM9 953 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 ENDOVQ8N8Q3 282 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 ANKS1AQ92625 1134 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 DDX50Q9BQ39 737 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 UTP11Q9Y3A2 253 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 O00370 1275 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 RNMTO43148 476 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 PDXDC1Q6P996 788 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 SESTD1Q86VW0 696 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 EPS8L3Q8TE67 593 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 AZIN2Q96A70 460 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 DHTKD1Q96HY7 919 aaPredicted RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 PUS3Q9BZE2 481 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 CARD9Q9H257 536 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 PGRMC1O00264 195 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 CD151P48509 253 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 PMS2P54278 862 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 DEUP1Q05D60 604 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 PARP6Q2NL67 630 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 NEK9Q8TD19 979 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 ACTRT1Q8TDG2 376 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 PYM1Q9BRP8 204 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.36□□□□□ -0.11
IFT88-202ENST00000351808 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 CTNNAL1Q9UBT7 734 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 BZW2Q9Y6E2 419 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 HEG1Q9ULI3 1381 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 TJP3O95049 919 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 GNA14O95837 355 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 AGTP01019 485 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 NUDT17P0C025 328 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 ETS2P15036 469 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 SKIV2L2P42285 1042 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 AKAP4Q5JQC9 854 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 PABPC3Q9H361 631 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 PRKAG3Q9UGI9 489 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 HAO1Q9UJM8 370 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 SIGLEC16A6NMB1 481 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 HNRNPRO43390 633 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 ZNF189O75820 626 aaPredicted RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 TARSP26639 723 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 CCNFP41002 786 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 NAALADL2Q58DX5 795 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 AKNAD1Q5T1N1 836 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 ECHDC2Q86YB7 292 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 FANCBQ8NB91 859 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
IFT88-202ENST00000351808 ATP8B4Q8TF62 1192 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.11
IFT88-202ENST00000351808 PRDM16Q9HAZ2 1276 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 CCDC87Q9NVE4 849 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 KLHL14Q9P2G3 628 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 INTUQ9ULD6 942 aa14.36□□□□□ -0.11
IFT88-202ENST00000351808 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 CYP1A1P04798 512 aaPredicted RBP14.35□□□□□ -0.11
IFT88-202ENST00000351808 ARID5AQ03989 594 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 SLC9C1Q4G0N8 1177 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 C6orf118Q5T5N4 469 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 CEP128Q6ZU80 1094 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 COL23A1Q86Y22 540 aaPredicted RBP14.35□□□□□ -0.11
IFT88-202ENST00000351808 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 FAM192AQ9GZU8 254 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
IFT88-202ENST00000351808 TXLNGQ9NUQ3 528 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 USH1CQ9Y6N9 552 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 EYA2O00167 538 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 TLR2O60603 784 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 SKIP12755 728 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 CREB1P16220 341 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 XBP1P17861 261 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 USP11P51784 963 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 FOXO4P98177 505 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 STK4Q13043 487 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 WTAPQ15007 396 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 CCDC6Q16204 474 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 OTUD6AQ7L8S5 288 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 GDAP1Q8TB36 358 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 SEC14L1Q92503 715 aa14.35□□□□□ -0.11
IFT88-202ENST00000351808 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 A0A087X0T9 212 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 MAGEA13PA6NCF6 341 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 PP2D1A8MPX8 630 aa14.34□□□□□ -0.11
IFT88-202ENST00000351808 CCDC188H7C350 402 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms