RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 HNRNPH3P31942 346 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 CTCFP49711 727 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 ZBED6P86452 979 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 MTMR1Q13613 665 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 KNOP1Q1ED39 458 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 FKBP15Q5T1M5 1219 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 SNRNP48Q6IEG0 339 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 WDR59Q6PJI9 974 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 CYP26C1Q6V0L0 522 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 NSMFQ6X4W1 530 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 LBX2Q6XYB7 198 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 PHLPP2Q6ZVD8 1323 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 USP50Q70EL3 339 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 MIER3Q7Z3K6 550 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 CREBRFQ8IUR6 639 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 TRIM59Q8IWR1 403 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 C4orf19Q8IY42 314 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 RDM1Q8NG50 284 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 KIF18AQ8NI77 898 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 PIGOQ8TEQ8 1089 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 ZC3H15Q8WU90 426 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 EEF2KMTQ96G04 330 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 LXNQ9BS40 222 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 STRA6Q9BX79 667 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 EDEM3Q9BZQ6 932 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 BCAS3Q9H6U6 928 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 ZSWIM4Q9H7M6 989 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 L2HGDHQ9H9P8 463 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 HOMER2Q9NSB8 354 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 CYP39A1Q9NYL5 469 aa7.65□□□□□ -1.18
TRIM55-203ENST00000350034 LUC7L2Q9Y383 392 aaKnown RBP7.65□□□□□ -1.18
TRIM55-203ENST00000350034 RBBP6Q7Z6E9 1792 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ASTN1O14525 1302 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 NFASCO94856 1347 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 A0A0G2JLL6 359 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 SPDYE5A6NIY4 337 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 TRAF5O00463 557 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 CXCL11O14625 94 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 FANCGO15287 622 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 TGFB1I1O43294 461 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PPP1R12BO60237 982 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ATP9AO75110 1047 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PPP1R37O75864 691 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 STAM2O75886 525 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 RGS20O76081 388 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 FAM13AO94988 1023 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 CCNE2O96020 404 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 CCDC175P0C221 793 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 MYBP10242 640 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 MAPTP10636 758 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 CCND2P30279 289 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 SFNP31947 248 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 QARSP47897 775 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 KLK7P49862 253 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 JAK3P52333 1124 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 KRT76Q01546 638 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PPATQ06203 517 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 RAD51AP2Q09MP3 1159 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 KCNMA1Q12791 1236 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ARHGEF16Q5VV41 709 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF746Q6NUN9 644 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 DLK2Q6UY11 383 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF662Q6ZS27 426 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF720Q7Z2F6 126 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 FRMD5Q7Z6J6 570 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PRRT2Q7Z6L0 340 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 NLRX1Q86UT6 975 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 RIOX2Q8IUF8 465 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 NELFCDQ8IXH7 590 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 DAW1Q8N136 415 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PROCA1Q8NCQ7 364 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 CHST13Q8NET6 341 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 NSUN6Q8TEA1 469 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 BORCS6Q96GS4 357 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PURBQ96QR8 312 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ACAD9Q9H845 621 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 MRPL44Q9H9J2 332 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 PARVGQ9HBI0 331 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 A1CFQ9NQ94 594 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 TYW1Q9NV66 732 aaKnown RBP7.64□□□□□ -1.19
TRIM55-203ENST00000350034 FAM184BQ9ULE4 1060 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 KCNH4Q9UQ05 1017 aa7.64□□□□□ -1.19
TRIM55-203ENST00000350034 ZMYM2Q9UBW7 1377 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ZC3H4Q9UPT8 1303 aaKnown RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ARHGEF35A5YM69 484 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 WDR64B1ANS9 1081 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 SPATA31C2B4DYI2 1134 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 DDX39AO00148 427 aaKnown RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 CETN3O15182 167 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 EPHB6O15197 1021 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 SLC16A3O15427 465 aaKnown RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 CALUO43852 315 aaPredicted RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 STBD1O95210 358 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 NR3C1P04150 777 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 MYCLP12524 364 aaPredicted RBP7.63□□□□□ -1.19
TRIM55-203ENST00000350034 KCNA2P16389 499 aa7.63□□□□□ -1.19
TRIM55-203ENST00000350034 ICAM3P32942 547 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms