RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 ZNF302Q9NR11 478 aa14.28□□□□□ -0.12
ERGIC3-202ENST00000348547 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
ERGIC3-202ENST00000348547 SAMM50Q9Y512 469 aa14.28□□□□□ -0.12
ERGIC3-202ENST00000348547 A0A1W2PQ45 241 aaPredicted RBP14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 A0A1W2PQY0 241 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 BACH1O14867 736 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 LYPLA2O95372 231 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 HOXC8P31273 242 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 QARSP47897 775 aaKnown RBP14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 STAT5BP51692 787 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 TARBP2Q15633 366 aaKnown RBP14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 PDXDC2PQ6P474 469 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 TPH2Q8IWU9 490 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 TUFT1Q9NNX1 390 aa14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.12
ERGIC3-202ENST00000348547 E9PMD0 336 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 H3BRB1 525 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 DNM1LO00429 736 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 P4HBP07237 508 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 EN2P19622 333 aaPredicted RBP14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 PSEN2P49810 448 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 NPEPPSP55786 919 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 PSMC5P62195 406 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 MARCH8Q5T0T0 291 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 PLPPR4Q7Z2D5 763 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 TRMT1LQ7Z2T5 733 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 FMR1NBQ8N0W7 255 aaPredicted RBP14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 PDILTQ8N807 584 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 GPT2Q8TD30 523 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 ABHD8Q96I13 439 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 TUT1Q9H6E5 874 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 PCDH10Q9P2E7 1040 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
ERGIC3-202ENST00000348547 CHD9Q3L8U1 2897 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 OATP04181 439 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 MCM4P33991 863 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 UBA7P41226 1012 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 ADAM17P78536 824 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 ZNF200P98182 395 aaPredicted RBP14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 MFSD10Q14728 455 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 ZRSR1Q15695 479 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 NBPF20Q3BBV1 942 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 RNF180Q86T96 592 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 SLC43A3Q8NBI5 491 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 NEK9Q8TD19 979 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 ATP8B4Q8TF62 1192 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 MRPS27Q92552 414 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 GLG1Q92896 1179 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 WNT8BQ93098 351 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 TSEN34Q9BSV6 310 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 MTG1Q9BT17 334 aaPredicted RBP14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 SMARCAD1Q9H4L7 1026 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 ZSWIM4Q9H7M6 989 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
ERGIC3-202ENST00000348547 NR1I2O75469 434 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 SMIM10L2AP0DMW4 78 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 SMIM10L2BP0DMW5 78 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 ARSHQ5FYA8 562 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 KRT79Q5XKE5 535 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 GRAMD1CQ8IYS0 662 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 LMBR1Q8WVP7 490 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 RUSC1Q9BVN2 902 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 RAB34Q9BZG1 259 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 MYH11P35749 1972 aa14.24□□□□□ -0.13
ERGIC3-202ENST00000348547 POLR2DO15514 142 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 TFRCP02786 760 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 INSRRP14616 1297 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 CASP1P29466 404 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 YWHABP31946 246 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 RARRES1P49788 294 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 SLC12A3P55017 1021 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 SOX10P56693 466 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 DRP2Q13474 957 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 MCM6Q14566 821 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 FAM160B1Q5W0V3 765 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 GDF6Q6KF10 455 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 ARRDC4Q8NCT1 418 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 DHX58Q96C10 678 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 NIFKQ9BYG3 293 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 POLD4Q9HCU8 107 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 XPNPEP1Q9NQW7 623 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 PDLIM7Q9NR12 457 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 SETD4Q9NVD3 440 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 HDAC6Q9UBN7 1215 aa14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 SEPT9Q9UHD8 586 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-202ENST00000348547 NPHP3-ACAD11A0A0J9YXS1 232 aa14.22□□□□□ -0.13
ERGIC3-202ENST00000348547 MOXD2PA6NHM9 499 aa14.22□□□□□ -0.13
ERGIC3-202ENST00000348547 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
ERGIC3-202ENST00000348547 C22orf31O95567 290 aa14.22□□□□□ -0.13
ERGIC3-202ENST00000348547 CHMP4BP1P59074 171 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms