RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SYT2Q8N9I0 419 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 CAGE1Q8TC20 777 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 EXOC4Q96A65 974 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 EIF2AK1Q9BQI3 630 aaKnown RBP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 TMEM51Q9NW97 253 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 ZNHIT6Q9NWK9 470 aaKnown RBP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 SWAP70Q9UH65 585 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 HDAC9Q9UKV0 1011 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 NENFQ9UMX5 172 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 MYO3BQ8WXR4 1341 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 MYH11P35749 1972 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 KIF13BQ9NQT8 1826 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 ANO9A1A5B4 782 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 CALCAP01258 141 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 UCHL3P15374 230 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 NPR1P16066 1061 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SPA17Q15506 151 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 NAB2Q15742 525 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TSR1Q2NL82 804 aaKnown RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 GPATCH4Q5T3I0 446 aaKnown RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 MEI1Q5TIA1 1274 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 RINT1Q6NUQ1 792 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC174Q6PII3 467 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 CACNA2D4Q7Z3S7 1137 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 KRT27Q7Z3Y8 459 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 FAM114A1Q8IWE2 563 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 IL31RAQ8NI17 732 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 LNX1Q8TBB1 728 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 CASKIN2Q8WXE0 1202 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SLC35C1Q96A29 364 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DYDC2Q96IM9 177 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 INPP4AQ96PE3 977 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 HSD17B14Q9BPX1 270 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 IDI2Q9BXS1 227 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DEF6Q9H4E7 631 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 CEP72Q9P209 647 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 NFU1Q9UMS0 254 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DDX3XO00571 662 aaKnown RBP eCLIP6.64□□□□□ -1.352e-11■■■□□ 15.3
CLCN3-201ENST00000347613 EGFRP00533 1210 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 RPA1P27694 616 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 USP11P51784 963 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 PSMD2Q13200 908 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SLC18A3Q16572 532 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 KIAA0753Q2KHM9 967 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SFMBT2Q5VUG0 894 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 KCTD16Q68DU8 428 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 MAEAQ7L5Y9 396 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DAW1Q8N136 415 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TRIM58Q8NG06 486 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 AP1M1Q9BXS5 423 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 BMP2KQ9NSY1 1161 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 AIPL1Q9NZN9 384 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 NYAP2Q9P242 653 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 PI4KBQ9UBF8 816 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 RGS17Q9UGC6 210 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 FZD1Q9UP38 647 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 GRIN2DO15399 1336 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 CNTNAP1P78357 1384 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DOCK5Q9H7D0 1870 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF233A6NK53 670 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 hCG_1984214I3L0E3 225 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 MARCH6O60337 910 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TRIM49P0CI25 452 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TRIM49CP0CI26 452 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 ACTN2P35609 894 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SREBF1P36956 1147 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 JAM2P57087 298 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TUBB2AQ13885 445 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 PLS1Q14651 629 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 KNOP1Q1ED39 458 aaKnown RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 ABCB5Q2M3G0 1257 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 Q4G0T1 1027 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DCAF17Q5H9S7 520 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 DCAF12L1Q5VU92 463 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 IQCEQ6IPM2 695 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 SLF2Q8IX21 1173 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF713Q8N859 430 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 LRRC57Q8N9N7 239 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 OR2W6PQ8NHA6 318 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 PLEKHO2Q8TD55 490 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 ZIM3Q96PE6 472 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 KRT12Q99456 494 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TUBB2BQ9BVA1 445 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 PKD2L1Q9P0L9 805 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TRPC5Q9UL62 973 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-201ENST00000347613 PCDHB13Q9Y5F0 798 aa6.64□□□□□ -1.35
CLCN3-201ENST00000347613 TARSL2A2RTX5 802 aaKnown RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 TMCO5BA8MYB1 307 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 RAD51CO43502 376 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 CFBP00751 764 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 SERPING1P05155 500 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 MMP14P50281 582 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 GUCY2FP51841 1108 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 ORC2Q13416 577 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 MKRN4PQ13434 485 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms