RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ALADP13716 330 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 PAPOLAP51003 745 aaKnown RBP16.69■□□□□ 0.26
LMNA-201ENST00000347559 RPS6KA3P51812 740 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 NELFCDQ8IXH7 590 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 EPS8L3Q8TE67 593 aaKnown RBP16.69■□□□□ 0.26
LMNA-201ENST00000347559 CDK5RAP3Q96JB5 506 aa16.69■□□□□ 0.26
LMNA-201ENST00000347559 USP15Q9Y4E8 981 aaPredicted RBP16.69■□□□□ 0.26
LMNA-201ENST00000347559 STXBP3O00186 592 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 NUGGCQ68CJ6 796 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 NUCKS1Q9H1E3 243 aaKnown RBP16.68■□□□□ 0.26
LMNA-201ENST00000347559 MYH1P12882 1939 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 HIP1RO75146 1068 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 PPFIA2O75334 1257 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 ACTN1P12814 892 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 PDE6CP51160 858 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 RNF25Q96BH1 459 aaPredicted RBP16.68■□□□□ 0.26
LMNA-201ENST00000347559 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 EDEM3Q9BZQ6 932 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.68■□□□□ 0.26
LMNA-201ENST00000347559 COL4A3BPQ9Y5P4 624 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 TSPY2A6NKD2 308 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 PSMD2Q13200 908 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 ANKRD42Q8N9B4 389 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 RAB17Q9H0T7 212 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 SLITRK6Q9H5Y7 841 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 MAGEF1Q9HAY2 307 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 PIDD1Q9HB75 910 aa16.68■□□□□ 0.26
LMNA-201ENST00000347559 ADAMTS7Q9UKP4 1686 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 A6NHS1 94 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 FGFR2P21802 821 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 ALKBH5Q6P6C2 394 aaKnown RBP16.67■□□□□ 0.26
LMNA-201ENST00000347559 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 SUN1O94901 812 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
LMNA-201ENST00000347559 TRAF1Q13077 416 aa16.67■□□□□ 0.26
LMNA-201ENST00000347559 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
LMNA-201ENST00000347559 GUF1Q8N442 669 aaKnown RBP16.67■□□□□ 0.26
LMNA-201ENST00000347559 ZNF526Q8TF50 670 aaPredicted RBP16.67■□□□□ 0.26
LMNA-201ENST00000347559 PABPC3Q9H361 631 aaKnown RBP16.67■□□□□ 0.26
LMNA-201ENST00000347559 FGFR4P22455 802 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 RNASELQ05823 741 aaKnown RBP16.66■□□□□ 0.26
LMNA-201ENST00000347559 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 TPCN2Q8NHX9 752 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 GDAP1Q8TB36 358 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 FBXO25Q8TCJ0 367 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 SEMA4AQ9H3S1 761 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 NKX1-2Q9UD57 310 aaPredicted RBP16.66■□□□□ 0.26
LMNA-201ENST00000347559 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 ZMYND8Q9ULU4 1186 aaPredicted RBP16.66■□□□□ 0.26
LMNA-201ENST00000347559 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 AHCYL1O43865 530 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 FESP07332 822 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 KRT13P13646 458 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 TUBP50607 506 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 DR1Q01658 176 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
LMNA-201ENST00000347559 UNC13DQ70J99 1090 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 LRRC57Q8N9N7 239 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 ATP8B4Q8TF62 1192 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 EPB41L4BQ9H329 900 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 DAAM1Q9Y4D1 1078 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 RGPD5Q99666 1765 aa16.66■□□□□ 0.26
LMNA-201ENST00000347559 MAP3K13O43283 966 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 ZNF131P52739 623 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 ZNF211Q13398 564 aaPredicted RBP16.65■□□□□ 0.26
LMNA-201ENST00000347559 CCDC25Q86WR0 208 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 TEKT4Q8WW24 435 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 SYN2Q92777 582 aaPredicted RBP16.65■□□□□ 0.26
LMNA-201ENST00000347559 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
LMNA-201ENST00000347559 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 ETNK1Q9HBU6 452 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 KCNK9Q9NPC2 374 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 H0Y3Z8 333 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 CES2O00748 559 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 BNIP1Q12981 228 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 FITM2Q8N6M3 262 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 PGM2Q96G03 612 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 RAD23BP54727 409 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 FKBP3Q00688 224 aaKnown RBP16.65■□□□□ 0.26
LMNA-201ENST00000347559 SEPT2Q15019 361 aa16.65■□□□□ 0.26
LMNA-201ENST00000347559 LARP4BQ92615 738 aaKnown RBP16.65■□□□□ 0.26
LMNA-201ENST00000347559 FOXO6A8MYZ6 492 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 LIN7AO14910 233 aaPredicted RBP16.64■□□□□ 0.25
LMNA-201ENST00000347559 CYP2D6P10635 497 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 FERP16591 822 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 ADCY1Q08828 1119 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 CNGA2Q16280 664 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 CWF19L1Q69YN2 538 aaKnown RBP16.64■□□□□ 0.25
LMNA-201ENST00000347559 DNAJC10Q8IXB1 793 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 FBF1Q8TES7 1133 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 AK8Q96MA6 479 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 ARHGEF3Q9NR81 526 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 NAGPAQ9UK23 515 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 MROH5Q6ZUA9 1318 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 ANO7Q6IWH7 933 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms