RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ACTN1P12814 892 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 PGM5Q15124 567 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 SPA17Q15506 151 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 TRIM65Q6PJ69 517 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 NAA15Q9BXJ9 866 aaKnown RBP18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 HIP1RO75146 1068 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 TMEM132BQ14DG7 1078 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 GTPBP4Q9BZE4 634 aaKnown RBP18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 ITIH6Q6UXX5 1313 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 IRX3P78415 501 aaPredicted RBP18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 HYIQ5T013 277 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 HS2ST1Q7LGA3 356 aa18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 POLR3CQ9BUI4 534 aaPredicted RBP18.91■□□□□ 0.62
SMARCC2-202ENST00000347471 GOLGA6L9A6NEM1 432 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 EPHA7Q15375 998 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 TREML2Q5T2D2 321 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 UBXN4Q92575 508 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 SPAG5Q96R06 1193 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 PSMB7Q99436 277 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 NHEJ1Q9H9Q4 299 aaPredicted RBP18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 TISP43B9A030 160 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 SYT17Q9BSW7 474 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 KIFC3Q9BVG8 833 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 CAPN11Q9UMQ6 739 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 SPDYE4A6NLX3 237 aa18.9■□□□□ 0.62
SMARCC2-202ENST00000347471 FANCGO15287 622 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 NR3C1P04150 777 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 CYLC1P35663 651 aaPredicted RBP18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 HSD17B4P51659 736 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 CNTN2Q02246 1040 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 NCBP1Q09161 790 aaKnown RBP18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 KCNH2Q12809 1159 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 PXMP2Q9NR77 195 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 TELO2Q9Y4R8 837 aa18.89■□□□□ 0.62
SMARCC2-202ENST00000347471 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 A0A1W2PQC6 194 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 XRCC5P13010 732 aaKnown RBP18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 ZNF710Q8N1W2 664 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 TEX13BQ9BXU2 312 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 CALUO43852 315 aaPredicted RBP18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 EPB41P11171 864 aaKnown RBP18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 ZBED6P86452 979 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 MAP3K10Q02779 954 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 PTPROQ16827 1216 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 CAPZA3Q96KX2 299 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 NUP58Q9BVL2 599 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 AGO4Q9HCK5 861 aaKnown RBP18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 TUFT1Q9NNX1 390 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 DUSP10Q9Y6W6 482 aa18.89■□□□□ 0.61
SMARCC2-202ENST00000347471 EXOC3O60645 756 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 PEX3P56589 373 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 UGCGQ16739 394 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 DPY19L2Q6NUT2 758 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 PCNTO95613 3336 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 AKAP3O75969 853 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 PPP2R5CQ13362 524 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 GABBR1Q9UBS5 961 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 IRF6O14896 467 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 USP2O75604 605 aaPredicted RBP18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 P4HBP07237 508 aaKnown RBP18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 TRIM49P0CI25 452 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 TRIM49CP0CI26 452 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 EIF4A3P38919 411 aaKnown RBP18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 QARSP47897 775 aaKnown RBP18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 WDR59Q6PJI9 974 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 DNAAF5Q86Y56 855 aa18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 A1CFQ9NQ94 594 aaKnown RBP18.88■□□□□ 0.61
SMARCC2-202ENST00000347471 GOLGA8IPA6NC78 632 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 GOLGA8JA6NMD2 632 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 DSG3P32926 999 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 MAP3K9P80192 1104 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 EHHADHQ08426 723 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 SWSAP1Q6NVH7 229 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 JADE2Q9NQC1 790 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 SEPT11Q9NVA2 429 aaKnown RBP18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 PITPNM2Q9BZ72 1349 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 SLC9A1P19634 815 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 YWHABP31946 246 aaKnown RBP18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 FAM133AQ8N9E0 248 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 JAKMIP2Q96AA8 810 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 RASSF10A6NK89 507 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 SLC16A4O15374 487 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 PLA2G6O60733 806 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 YBX3P16989 372 aaKnown RBP eCLIP18.87■□□□□ 0.616e-7■■□□□ 11.4
SMARCC2-202ENST00000347471 RPL13P26373 211 aaKnown RBP18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 NF2P35240 595 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 ACAD9Q9H845 621 aa18.87■□□□□ 0.61
SMARCC2-202ENST00000347471 CCND2P30279 289 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 KCNJ6P48051 423 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 NSUN6Q8TEA1 469 aaKnown RBP18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 RIT2Q99578 217 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 KCTD10Q9H3F6 313 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 USP20Q9Y2K6 914 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
SMARCC2-202ENST00000347471 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms