RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DIS3L2Q8IYB7 885 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 WNT8BQ93098 351 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 FAM161BQ96MY7 647 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 ZBED2Q9BTP6 218 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
TSPAN4-201ENST00000346501 TBX3O15119 743 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 DKC1O60832 514 aaKnown RBP eCLIP17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 NBNO60934 754 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 NME8Q8N427 588 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 OXER1Q8TDS5 423 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 DNAJB3Q8WWF6 145 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 APBB2Q92870 758 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 KIF2CQ99661 725 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 PBX4Q9BYU1 374 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 FAM49AQ9H0Q0 323 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 SEMA6BQ9H3T3 888 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 PCDHA2Q9Y5H9 948 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 PCDHA11Q9Y5I1 949 aa17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 MAFBQ9Y5Q3 323 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 RANBP2P49792 3224 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-201ENST00000346501 GRXCR1A8MXD5 290 aa17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 DTNBO60941 627 aa17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 PSMD10O75832 226 aa17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 KLRC1P26715 233 aa17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 FAM26DQ5JW98 314 aa17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 TRMT1LQ7Z2T5 733 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 MBOAT7Q96N66 472 aa17.77■□□□□ 0.44
TSPAN4-201ENST00000346501 SCN5AQ14524 2016 aa17.77■□□□□ 0.43
TSPAN4-201ENST00000346501 SMIM35A0A1B0GVV1 85 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 BTBD18B2RXH4 712 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 MAGEB2O15479 319 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 AMHP03971 560 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 TMOD1P28289 359 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 NR5A1Q13285 461 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 ODR4Q5SWX8 454 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 MTHFD1LQ6UB35 978 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 USP38Q8NB14 1042 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 DBF4BQ8NFT6 615 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 TBC1D32Q96NH3 1257 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 IFIH1Q9BYX4 1025 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 UNC45AQ9H3U1 944 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 ZNF576Q9H609 170 aa17.76■□□□□ 0.43
TSPAN4-201ENST00000346501 OATP04181 439 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 WDR5P61964 334 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 MRPS6P82932 125 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 PLEKHG4Q58EX7 1191 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 MARCH8Q5T0T0 291 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 TRAF7Q6Q0C0 670 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 ETNPPLQ8TBG4 499 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 TRAPPC12Q8WVT3 735 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 VWCEQ96DN2 955 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 TRPV2Q9Y5S1 764 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 CDY2AQ9Y6F7 541 aa17.75■□□□□ 0.43
TSPAN4-201ENST00000346501 IGSF9BQ9UPX0 1349 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 MYH9P35579 1960 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 SLC37A4O43826 429 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 EDIL3O43854 480 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 TLL1O43897 1013 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 PBX2P40425 430 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 GUCY1B3Q02153 619 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 PRKCEQ02156 737 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 MBTPS1Q14703 1052 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 GPNMBQ14956 572 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 PPP2R2DQ66LE6 453 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 FAM43BQ6ZT52 329 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 METTL13Q8N6R0 699 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 MAP7D2Q96T17 732 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 GAS2L1Q99501 681 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 NKX2-4Q9H2Z4 354 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 STXBP5LQ9Y2K9 1186 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 SQORQ9Y6N5 450 aa17.74■□□□□ 0.43
TSPAN4-201ENST00000346501 NEMFO60524 1076 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 GHRP10912 638 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 RABGGTBP53611 331 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 PSMC5P62195 406 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 ST3GAL1Q11201 340 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 CALCRLQ16602 461 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 XKR3Q5GH77 459 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 MYOCDQ8IZQ8 938 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 CELF4Q9BZC1 486 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 FOXP1Q9H334 677 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 KCNMB3Q9NPA1 279 aa17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-201ENST00000346501 CHRNA1P02708 482 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 DNM2P50570 870 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 TBC1D8BQ0IIM8 1120 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 PPP2R5CQ13362 524 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 TSHZ1Q6ZSZ6 1077 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 EXOC8Q8IYI6 725 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 TNFRSF25Q93038 417 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 GJA10Q969M2 543 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 TMX3Q96JJ7 454 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms