RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.58■□□□□ 0.08
CDK5RAP1-202ENST00000346416 KIF5CO60282 957 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 USP2O75604 605 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ABL1P00519 1130 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 P4HBP07237 508 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 KCNA1Q09470 495 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TMEM132BQ14DG7 1078 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 DLK2Q6UY11 383 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CATSPERGQ6ZRH7 1159 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SMCR8Q8TEV9 937 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TBC1D22BQ9NU19 505 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 REXO2Q9Y3B8 237 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SAMM50Q9Y512 469 aa15.57■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CALUO43852 315 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NMT1P30419 496 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZSWIM4Q9H7M6 989 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TYW1Q9NV66 732 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ASTN1O14525 1302 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TESPA1A2RU30 521 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ARHGEF35A5YM69 484 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ATP9AO75110 1047 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ARHGAP25P42331 645 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZNF131P52739 623 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 KCNMA1Q12791 1236 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ANKRD7Q92527 254 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NHEJ1Q9H9Q4 299 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 FAM184BQ9ULE4 1060 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ODF2LQ9ULJ1 636 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PLAGL2Q9UPG8 496 aa15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 V9GYY5 206 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP1-202ENST00000346416 LOXHD1Q8IVV2 1947 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 EIF3DO15371 548 aaKnown RBP eCLIP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 GUCY2CP25092 1073 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 HNRNPH3P31942 346 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CDK17Q00537 523 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NEK11Q8NG66 645 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TEX13BQ9BXU2 312 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ADARB2Q9NS39 739 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SEL1LQ9UBV2 794 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ATP2A1O14983 1001 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NR3C1P04150 777 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CYLC1P35663 651 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 QARSP47897 775 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 VGLL4Q14135 290 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZC2HC1CQ53FD0 456 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 VSIG10LQ86VR7 867 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 FAM178BQ8IXR5 827 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CCDC170Q8IYT3 715 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 FIZ1Q96SL8 496 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 HOXC10Q9NYD6 342 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 RNF181Q9P0P0 153 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SNCAIPQ9Y6H5 919 aa15.55■□□□□ 0.08
CDK5RAP1-202ENST00000346416 MYH11P35749 1972 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SPDYE16A6NNV3 312 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 TGFB1I1O43294 461 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NR3C2P08235 984 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 RPL13P26373 211 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZNF569Q5MCW4 686 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ODR4Q5SWX8 454 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 XRRA1Q6P2D8 792 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PADI6Q6TGC4 694 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 RRAGAQ7L523 313 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZNF720Q7Z2F6 126 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 FRMD5Q7Z6J6 570 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 LRRN4CLQ8ND94 238 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 BAP1Q92560 729 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CRACR2AQ9BSW2 395 aa15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ARMCX3Q9UH62 379 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP1-202ENST00000346416 LRRC53A6NM62 1247 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CLIC2O15247 247 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 HIP1RO75146 1068 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 AKAP3O75969 853 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CCND2P30279 289 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 HERVK_113P62684 666 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 KRT83P78385 493 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 KCNH2Q12809 1159 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PLS1Q14651 629 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SH3D19Q5HYK7 790 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CACNA2D4Q7Z3S7 1137 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 DAW1Q8N136 415 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 RBM46Q8TBY0 533 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 IKZF4Q9H2S9 585 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ZMYM2Q9UBW7 1377 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 EIF3CLB5ME19 914 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ADM5C9JUS6 153 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CCNE2O96020 404 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 PLEKP08567 350 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 RARRES1P49788 294 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 MAPK7Q13164 816 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 SULF1Q8IWU6 871 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 NSUN6Q8TEA1 469 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 CCDC42Q96M95 316 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 EIF3CQ99613 913 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 ACAD9Q9H845 621 aa15.53■□□□□ 0.08
CDK5RAP1-202ENST00000346416 A1CFQ9NQ94 594 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms