RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ANKRD20A12PQ8NF67 263 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SREK1Q8WXA9 508 aaKnown RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 TACO1Q9BSH4 297 aaKnown RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 PHF7Q9BWX1 381 aaPredicted RBP8.27□□□□□ -1.09
ZNF540-202ENST00000343599 SPZ1Q9BXG8 430 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 PSD3Q9NYI0 1048 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 EPS15L1Q9UBC2 864 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 PALD1Q9ULE6 856 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 CNTNAP2Q9UHC6 1331 aa8.27□□□□□ -1.09
ZNF540-202ENST00000343599 PNMA6EA0A0J9YXQ4 647 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 ESYT2A0FGR8 921 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PLA2G4AP47712 749 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 GNAQP50148 359 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 STXBP2Q15833 593 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PTPN21Q16825 1174 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 CELF3Q5SZQ8 465 aaKnown RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 FAM210AQ96ND0 272 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 INPP4AQ96PE3 977 aaPredicted RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 MCM9Q9NXL9 1143 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 FZD1Q9UP38 647 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 E9PAM4 449 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 SNAP23O00161 211 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 HSPD1P10809 573 aaKnown RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 CNR2P34972 360 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 SHC2P98077 582 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 GPS2Q13227 327 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 GPNMBQ14956 572 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 KIAA1755Q5JYT7 1200 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 MMS22LQ6ZRQ5 1243 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 TRIM67Q6ZTA4 783 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PANK1Q8TE04 598 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 DDX11Q96FC9 970 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 GPR20Q99678 358 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PI4K2AQ9BTU6 479 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 KRT23Q9C075 422 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 IGSF9Q9P2J2 1179 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 PCDHA2Q9Y5H9 948 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 EOMESO95936 686 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 CYP3A4P08684 503 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 CALM1P0DP23 149 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 CALM2P0DP24 149 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 CALM3P0DP25 149 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 LAG3P18627 525 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 LIG1P18858 919 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 BMPR1AP36894 532 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 POU5F1Q01860 360 aaKnown RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 SLC9C2Q5TAH2 1124 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 TSHZ1Q6ZSZ6 1077 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 GJD3Q8N144 294 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 TMTC2Q8N394 836 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 SMRP1Q8NCR6 262 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 ASIC4Q96FT7 647 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
ZNF540-202ENST00000343599 DDX23Q9BUQ8 820 aaKnown RBP8.26□□□□□ -1.09
ZNF540-202ENST00000343599 LILRB5O75023 590 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 DDAH1O94760 285 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 SARSP49591 514 aaKnown RBP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 BIRC2Q13490 618 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 KIAA1841Q6NSI8 718 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 PDXDC2PQ6P474 469 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 LCORLQ8N3X6 602 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 CNNM3Q8NE01 707 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 VN1R2Q8NFZ6 395 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 FAM212AQ96EL1 285 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 MRPL9Q9BYD2 267 aaKnown RBP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 UBN1Q9NPG3 1134 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 ZNF215Q9UL58 517 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 ELL2O00472 640 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 FIBPO43427 364 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 CKBP12277 381 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 PAK2Q13177 524 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 NONOQ15233 471 aaKnown RBP eCLIP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 ZC3H12AQ5D1E8 599 aaKnown RBP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 C15orf39Q6ZRI6 1047 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 VSIG10LQ86VR7 867 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 KAT2BQ92831 832 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 SMARCE1Q969G3 411 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
ZNF540-202ENST00000343599 HSFX1Q9UBD0 423 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 ZDHHC9Q9Y397 364 aa8.25□□□□□ -1.09
ZNF540-202ENST00000343599 TTC3P53804 2025 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 TBC1D4O60343 1298 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 PNMA6AP0CW24 399 aaPredicted RBP8.24□□□□□ -1.09
ZNF540-202ENST00000343599 TNNT1P13805 278 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 MUTP22033 750 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 CCND2P30279 289 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 ORC2Q13416 577 aaPredicted RBP8.24□□□□□ -1.09
ZNF540-202ENST00000343599 ZNF484Q5JVG2 852 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 METTL7BQ6UX53 244 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 CCDC105Q8IYK2 499 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms