RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 CNPY4Q8N129 248 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 PAF1Q8N7H5 531 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 MOV10L1Q9BXT6 1211 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 MLXIPQ9HAP2 919 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 GPHNQ9NQX3 736 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 AGPAT5Q9NUQ2 364 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 CEMIPQ8WUJ3 1361 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 KIF1AQ12756 1690 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ERVV-1B6SEH8 477 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 FOXN1O15353 648 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 TJP3O95049 919 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 PRPF38AQ8NAV1 312 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 GSDMBQ8TAX9 411 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ERGIC2Q96RQ1 377 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ORAI2Q96SN7 254 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 FBXL5Q9UKA1 691 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ARL2BPQ9Y2Y0 163 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 CPS1P31327 1500 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF18P17022 549 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 PTGISQ16647 500 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 CDKL2Q92772 493 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 CAVIN3Q969G5 261 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 DDX23Q9BUQ8 820 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 OSBPL1AQ9BXW6 950 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 TRIM10Q9UDY6 481 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 DIP2BQ9P265 1576 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ESYT3A0FGR9 886 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 GSTA1P08263 222 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 RFX1P22670 979 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 PRR16Q569H4 304 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ENAHQ8N8S7 591 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 GIMAP8Q8ND71 665 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 RNPC3Q96LT9 517 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 GAS7O60861 476 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 IL6STP40189 918 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 FIGNQ5HY92 759 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ANKRD40Q6AI12 368 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 SH2D3CQ8N5H7 860 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 RASGRP4Q8TDF6 673 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 C1orf112Q9NSG2 853 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 PLAGL2Q9UPG8 496 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 SALL1Q9NSC2 1324 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 DMP1Q13316 513 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 TXNRD1Q16881 649 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 KAZNQ674X7 775 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF662Q6ZS27 426 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 SPATA21Q7Z572 469 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 DNAJC8O75937 253 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 FDPSP14324 419 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 CASP1P29466 404 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 TBX2Q13207 712 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 PDCD7Q8N8D1 485 aaKnown RBP5.16□□□□□ -1.58
CSMD3-203ENST00000343508 SNF8Q96H20 258 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 FAM96AQ9H5X1 160 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 HAUS2Q9NVX0 235 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 LTN1O94822 1766 aa5.16□□□□□ -1.58
CSMD3-203ENST00000343508 LRRN2O75325 713 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PLEKHA8P1O95397 391 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PDHA1P08559 390 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 BRAFP15056 766 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 BFSP1Q12934 665 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 MYO1EQ12965 1108 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 NAB2Q15742 525 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 USH1GQ495M9 461 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ADSSL1Q8N142 457 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ANKS1AQ92625 1134 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 MS4A14Q96JA4 679 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 TEKT3Q9BXF9 490 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 RBM12Q9NTZ6 932 aaKnown RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PPP1R1BQ9UD71 204 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 CES2O00748 559 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ACSL3O95573 720 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 LRRC41Q15345 812 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 FRMD5Q7Z6J6 570 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PACS2Q86VP3 889 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 UHMK1Q8TAS1 419 aaKnown RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 MYCBPAPQ8TBZ2 947 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 AMACRQ9UHK6 382 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 SPEF2Q9C093 1822 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 NPHP4O75161 1426 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 FRMPD2Q68DX3 1309 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PPP1R3GB7ZBB8 358 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 STAM2O75886 525 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 GFPT2O94808 682 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ANP32DO95626 131 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 SATB1Q01826 763 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 EPHA10Q5JZY3 1008 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 SYDE1Q6ZW31 735 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 STAMBPL1Q96FJ0 436 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 C7orf25Q9BPX7 421 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 CDCA7Q9BWT1 371 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ZWINTO95229 277 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 TNNI1P19237 187 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 NSFP46459 744 aaKnown RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 GPC5P78333 572 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF449Q6P9G9 518 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF653Q96CK0 615 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 CCSER1Q9C0I3 900 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 FAF1Q9UNN5 650 aaPredicted RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms