RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 GUCY1A3Q02108 690 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 ALX1Q15699 326 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 POTEBQ6S5H4 581 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 SGMS1Q86VZ5 419 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.72□□□□□ -1.01
UBE4B-202ENST00000343090 CEP120Q8N960 986 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 CCHCR1Q8TD31 782 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 KLHL29Q96CT2 875 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 MAD1L1Q9Y6D9 718 aa8.72□□□□□ -1.01
UBE4B-202ENST00000343090 KCNQ2O43526 872 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 TDP2O95551 362 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 GH2P01242 217 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 FGGP02679 453 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 P4HA1P13674 534 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 YWHAEP62258 255 aaKnown RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 AOC3Q16853 763 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 BEND6Q5SZJ8 279 aaPredicted RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 EMBQ6PCB8 327 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 EEPD1Q7L9B9 569 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 RNF169Q8NCN4 708 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 CNKSR1Q969H4 720 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 DDX27Q96GQ7 796 aaKnown RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 WDR11Q9BZH6 1224 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 TYW1Q9NV66 732 aaKnown RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 MROH7-TTC4A0A0A0MT08 1334 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 HMGB1P1B2RPK0 211 aaPredicted RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 H7C0C1 242 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 SAT1P21673 171 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 ATP5OP48047 213 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 MXI1P50539 228 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 OSTNP61366 133 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 TMED2Q15363 201 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 ARMC9Q7Z3E5 817 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 ZBTB33Q86T24 672 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 GDAP1Q8TB36 358 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 HNRNPLLQ8WVV9 542 aaKnown RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 RAD54LQ92698 747 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 PBKQ96KB5 322 aa8.71□□□□□ -1.01
UBE4B-202ENST00000343090 FAM84BQ96KN1 310 aaPredicted RBP8.71□□□□□ -1.01
UBE4B-202ENST00000343090 COL15A1P39059 1388 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 REREQ9P2R6 1566 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 ARHGAP42A6NI28 874 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.027e-6■■■■■ 37.3
UBE4B-202ENST00000343090 ECEL1O95672 775 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 CD58P19256 250 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 DR1Q01658 176 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 IFRD2Q12894 506 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-202ENST00000343090 COASYQ13057 564 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 MTERF2Q49AM1 385 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 RFX6Q8HWS3 928 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.02
UBE4B-202ENST00000343090 POTEFA5A3E0 1075 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 ATP1A1P05023 1023 aaKnown RBP8.71□□□□□ -1.02
UBE4B-202ENST00000343090 POTEIP0CG38 1075 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 SEPT6Q14141 434 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 GRM4Q14833 912 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 POTEGQ6S5H5 508 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 POTEEQ6S8J3 1075 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 IGDCC4Q8TDY8 1250 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 MED10Q9BTT4 135 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 APOL6Q9BWW8 343 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 PCDHA6Q9UN73 950 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 PLAAQ9Y263 795 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 PCDHA8Q9Y5H6 950 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 CSADQ9Y600 493 aa8.71□□□□□ -1.02
UBE4B-202ENST00000343090 PAX7P23759 505 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 MAP7Q14244 749 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 LRRC8CQ8TDW0 803 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ZNF473Q8WTR7 871 aaKnown RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ANAPC5Q9UJX4 755 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ZBTB5O15062 677 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 SEPT2Q15019 361 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 SH2D4BQ5SQS7 431 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 TRIM50Q86XT4 487 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 KIRREL3Q8IZU9 778 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 CCT6BQ92526 530 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 CD209Q9NNX6 404 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 SLC40A1Q9NP59 571 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 KCNG1Q9UIX4 513 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 DNAJC12Q9UKB3 198 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 UBE2Q2LH0YL09 131 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 RNF8O76064 485 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 BAG2O95816 211 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 KRT1P04264 644 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ATP2C1P98194 919 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 CRYMQ14894 314 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 SLMAPQ14BN4 828 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 HAUS1Q96CS2 278 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 FMO2Q99518 471 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 CHP1Q99653 195 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 BARHL2Q9NY43 387 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms