RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 ZNF862O60290 1169 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 CAVIN1Q6NZI2 390 aaKnown RBP23.08■■□□□ 1.29
SNX21-201ENST00000342644 KCNK18Q7Z418 384 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 CEP57L1Q8IYX8 460 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 CNNM3Q8NE01 707 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 LARP4BQ92615 738 aaKnown RBP23.08■■□□□ 1.29
SNX21-201ENST00000342644 RAD54LQ92698 747 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 CCDC34Q96HJ3 373 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 PLIN2Q99541 437 aa23.08■■□□□ 1.29
SNX21-201ENST00000342644 ANKEF1Q9NU02 776 aa23.08■■□□□ 1.28
SNX21-201ENST00000342644 KBTBD4Q9NVX7 518 aa23.08■■□□□ 1.28
SNX21-201ENST00000342644 DBR1Q9UK59 544 aaKnown RBP23.08■■□□□ 1.28
SNX21-201ENST00000342644 SYNRGQ9UMZ2 1314 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 E9PMD0 336 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 ADAMTS4O75173 837 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 STBD1O95210 358 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 EYA4O95677 639 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 LGALS2P05162 132 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 PSMC6P62333 389 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 FSCN1Q16658 493 aaKnown RBP23.07■■□□□ 1.28
SNX21-201ENST00000342644 XKR3Q5GH77 459 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 SH3RF1Q7Z6J0 888 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 C16orf70Q9BSU1 422 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 TNMDQ9H2S6 317 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 XPNPEP3Q9NQH7 507 aa23.07■■□□□ 1.28
SNX21-201ENST00000342644 KPNA6O60684 536 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 ATP4AP20648 1035 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 CST5P28325 142 aaPredicted RBP23.06■■□□□ 1.28
SNX21-201ENST00000342644 YWHABP31946 246 aaKnown RBP23.06■■□□□ 1.28
SNX21-201ENST00000342644 LHX8Q68G74 356 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 SYT2Q8N9I0 419 aaPredicted RBP23.06■■□□□ 1.28
SNX21-201ENST00000342644 KLHDC9Q8NEP7 349 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 GLG1Q92896 1179 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 FAM167AQ96KS9 214 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.06■■□□□ 1.28
SNX21-201ENST00000342644 CLSTN2Q9H4D0 955 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 ERAP1Q9NZ08 941 aa23.06■■□□□ 1.28
SNX21-201ENST00000342644 C6orf222P0C671 652 aaPredicted RBP23.05■■□□□ 1.28
SNX21-201ENST00000342644 PLA2G4BP0C869 781 aa23.05■■□□□ 1.28
SNX21-201ENST00000342644 PRKCEQ02156 737 aa23.05■■□□□ 1.28
SNX21-201ENST00000342644 UTP14CQ5TAP6 766 aaKnown RBP23.05■■□□□ 1.28
SNX21-201ENST00000342644 SV2BQ7L1I2 683 aa23.05■■□□□ 1.28
SNX21-201ENST00000342644 OTUD6AQ7L8S5 288 aa23.05■■□□□ 1.28
SNX21-201ENST00000342644 PIGOQ8TEQ8 1089 aa23.05■■□□□ 1.28
SNX21-201ENST00000342644 PAK6Q9NQU5 681 aaPredicted RBP23.05■■□□□ 1.28
SNX21-201ENST00000342644 HOOK1Q9UJC3 728 aaKnown RBP23.05■■□□□ 1.28
SNX21-201ENST00000342644 OATP04181 439 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 MYL1P05976 194 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 SLC12A3P55017 1021 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 AMPD3Q01432 767 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 ANO5Q75V66 913 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 ARMC5Q96C12 935 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 PAGE5Q96GU1 130 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 MTRQ99707 1265 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 NIFKQ9BYG3 293 aaKnown RBP23.04■■□□□ 1.28
SNX21-201ENST00000342644 LRRC27Q9C0I9 530 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 NUP62CLQ9H1M0 184 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 NRBP2Q9NSY0 501 aa23.04■■□□□ 1.28
SNX21-201ENST00000342644 ZNF215Q9UL58 517 aaPredicted RBP23.04■■□□□ 1.28
SNX21-201ENST00000342644 H3BRB1 525 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 ZEB2O60315 1214 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 PGK1P00558 417 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 F2P00734 622 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 RARRES1P49788 294 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 MDM2Q00987 491 aaPredicted RBP23.03■■□□□ 1.28
SNX21-201ENST00000342644 MCM6Q14566 821 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 CCDC183Q5T5S1 534 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 TRIM50Q86XT4 487 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 ATP8B4Q8TF62 1192 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 BBXQ8WY36 941 aaPredicted RBP23.03■■□□□ 1.28
SNX21-201ENST00000342644 BHMT2Q9H2M3 363 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 TUT1Q9H6E5 874 aaKnown RBP23.03■■□□□ 1.28
SNX21-201ENST00000342644 TMEM63CQ9P1W3 806 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 PPME1Q9Y570 386 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 CENPFP49454 3210 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 FRMPD3Q5JV73 1810 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 ZBTB39O15060 712 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 BEX3Q00994 111 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 GNASQ5JWF2 1037 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 CCSAPQ6IQ19 270 aaPredicted RBP23.03■■□□□ 1.28
SNX21-201ENST00000342644 CNNM4Q6P4Q7 775 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 ZNF333Q96JL9 665 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 UNC93B1Q9H1C4 597 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 KCND2Q9NZV8 630 aa23.03■■□□□ 1.28
SNX21-201ENST00000342644 MYADML2A6NDP7 307 aa23.02■■□□□ 1.28
SNX21-201ENST00000342644 IRX5P78411 483 aaPredicted RBP23.02■■□□□ 1.28
SNX21-201ENST00000342644 PURAQ00577 322 aaKnown RBP23.02■■□□□ 1.28
SNX21-201ENST00000342644 PLCB4Q15147 1175 aa23.02■■□□□ 1.28
SNX21-201ENST00000342644 RNF180Q86T96 592 aa23.02■■□□□ 1.28
SNX21-201ENST00000342644 CKAP2LQ8IYA6 745 aa23.02■■□□□ 1.28
SNX21-201ENST00000342644 PCSK9Q8NBP7 692 aaKnown RBP23.02■■□□□ 1.28
SNX21-201ENST00000342644 A0A087WWV3 80 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 HBP1O60381 514 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 ZNF286BP0CG31 522 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 CCL5P13501 91 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 POSTNQ15063 836 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 MTFR1Q15390 333 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 ZSCAN23Q3MJ62 389 aa23.01■■□□□ 1.27
SNX21-201ENST00000342644 RBM43Q6ZSC3 357 aaKnown RBP23.01■■□□□ 1.27
SNX21-201ENST00000342644 KAT2BQ92831 832 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms