RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PTGS1P23219 599 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 CCND2P30279 289 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 SCRN1Q12765 414 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 KCNA10Q16322 511 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 PCNX4Q63HM2 1172 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPM3-207ENST00000341372 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
TPM3-207ENST00000341372 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 M0R2N6 131 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
TPM3-207ENST00000341372 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
TPM3-207ENST00000341372 UBE2SQ16763 222 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 SLC39A5Q6ZMH5 540 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
TPM3-207ENST00000341372 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 AP5M1Q9H0R1 490 aa11.72□□□□□ -0.53
TPM3-207ENST00000341372 ELP1O95163 1332 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 STK36Q9NRP7 1315 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.53
TPM3-207ENST00000341372 ASGR1P07306 291 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 TXNP10599 105 aaKnown RBP11.71□□□□□ -0.53
TPM3-207ENST00000341372 ICAM3P32942 547 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 ADCY7P51828 1080 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 NEK4P51957 841 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 AMPD3Q01432 767 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 GNASQ5JWF2 1037 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 ALG1LQ6GMV1 187 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 KCNV1Q6PIU1 500 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 CCDC12Q8WUD4 166 aaPredicted RBP11.71□□□□□ -0.53
TPM3-207ENST00000341372 DPF3Q92784 378 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 SLC26A6Q9BXS9 759 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 SLKQ9H2G2 1235 aaPredicted RBP11.71□□□□□ -0.53
TPM3-207ENST00000341372 NR2E3Q9Y5X4 410 aa11.71□□□□□ -0.53
TPM3-207ENST00000341372 LTBP2Q14767 1821 aa11.71□□□□□ -0.54
TPM3-207ENST00000341372 SMCO2A6NFE2 343 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 CPLX1O14810 134 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 ZBTB24O43167 697 aaPredicted RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 TGFB3P10600 412 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 MYCLP12524 364 aaPredicted RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 MZF1P28698 734 aaPredicted RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 BEX3Q00994 111 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 ARHGAP1Q07960 439 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 STK3Q13188 491 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 CPLX2Q6PUV4 134 aaKnown RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 TRIM22Q8IYM9 498 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 OR6J1Q8NGC5 347 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 COPS5Q92905 334 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 MYH7BA7E2Y1 1941 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 CABYRO75952 493 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 CDKL5O76039 1030 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 DEXIO95424 95 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 LARGE1O95461 756 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 GH1P01241 217 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 S100BP04271 92 aaPredicted RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 IGFBP4P22692 258 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 CPT1AP50416 773 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 RTP1P59025 263 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 SSRP1Q08945 709 aaKnown RBP11.7□□□□□ -0.54
TPM3-207ENST00000341372 ME3Q16798 604 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 CCDC148Q8NFR7 591 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 GTF3C6Q969F1 213 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 STARD7Q9NQZ5 370 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 AK5Q9Y6K8 562 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 DNAH12Q6ZR08 3092 aa11.7□□□□□ -0.54
TPM3-207ENST00000341372 ZEB2O60315 1214 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 UBA1P22314 1058 aaKnown RBP11.69□□□□□ -0.54
TPM3-207ENST00000341372 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 CKAP2LQ8IYA6 745 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 C7orf61Q8IZ16 206 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
TPM3-207ENST00000341372 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 H0YGN5 161 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 FIBPO43427 364 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
TPM3-207ENST00000341372 GNA11P29992 359 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 SREBF1P36956 1147 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 CDK7P50613 346 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 PURAQ00577 322 aaKnown RBP11.69□□□□□ -0.54
TPM3-207ENST00000341372 PAK2Q13177 524 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 TRIM60Q495X7 471 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 C16orf46Q6P387 395 aa11.69□□□□□ -0.54
TPM3-207ENST00000341372 ANKRD33Q7Z3H0 272 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms