RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SH2D4AQ9H788 454 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 GOPCQ9HD26 462 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 GTF2IRD1Q9UHL9 959 aa13.5□□□□□ -0.25
ATXN3-201ENST00000340660 RFX1P22670 979 aa13.49□□□□□ -0.25
ATXN3-201ENST00000340660 BTG3Q14201 252 aaPredicted RBP13.49□□□□□ -0.25
ATXN3-201ENST00000340660 NAALADL2Q58DX5 795 aa13.49□□□□□ -0.25
ATXN3-201ENST00000340660 C19orf48Q6RUI8 117 aa13.49□□□□□ -0.25
ATXN3-201ENST00000340660 PRR23CQ6ZRP0 262 aa13.49□□□□□ -0.25
ATXN3-201ENST00000340660 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
ATXN3-201ENST00000340660 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
ATXN3-201ENST00000340660 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
ATXN3-201ENST00000340660 MRPL42Q9Y6G3 142 aaKnown RBP13.49□□□□□ -0.25
ATXN3-201ENST00000340660 PIEZO2Q9H5I5 2752 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 TBC1D4O60343 1298 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 KRT38O76015 456 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 WEE2P0C1S8 567 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 HOXB8P17481 243 aaPredicted RBP13.48□□□□□ -0.25
ATXN3-201ENST00000340660 USP5P45974 858 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 INSM1Q01101 510 aaPredicted RBP13.48□□□□□ -0.25
ATXN3-201ENST00000340660 BRDTQ58F21 947 aaPredicted RBP13.48□□□□□ -0.25
ATXN3-201ENST00000340660 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 MORC4Q8TE76 937 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 PIK3R5Q8WYR1 880 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 SEPT8Q92599 483 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 KAT2BQ92831 832 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 COPS5Q92905 334 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 NUP88Q99567 741 aaPredicted RBP13.48□□□□□ -0.25
ATXN3-201ENST00000340660 SEMA4GQ9NTN9 838 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 SIT1Q9Y3P8 196 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 GPSM3Q9Y4H4 160 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
ATXN3-201ENST00000340660 FSD2A1L4K1 749 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 EIF4E1BA6NMX2 242 aaKnown RBP13.47□□□□□ -0.25
ATXN3-201ENST00000340660 RSPH10B2B2RC85 870 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 LRRN2O75325 713 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
ATXN3-201ENST00000340660 RSPH10BP0C881 870 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 SRGAP2BP0DMP2 458 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 BMP2P12643 396 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 PTK2Q05397 1052 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
ATXN3-201ENST00000340660 GLIS3Q8NEA6 775 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 MICAL1Q8TDZ2 1067 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 KCTD15Q96SI1 283 aaPredicted RBP13.47□□□□□ -0.25
ATXN3-201ENST00000340660 ADAM7Q9H2U9 754 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 FBXO4Q9UKT5 387 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 KIAA1671Q9BY89 1806 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 TEX15Q9BXT5 2789 aa13.47□□□□□ -0.25
ATXN3-201ENST00000340660 PLXNA4Q9HCM2 1894 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 CACNA1FO60840 1977 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 RBM47A0AV96 593 aaKnown RBP13.46□□□□□ -0.25
ATXN3-201ENST00000340660 AKR1B1P15121 316 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 CSTF1Q05048 431 aaKnown RBP13.46□□□□□ -0.25
ATXN3-201ENST00000340660 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.25
ATXN3-201ENST00000340660 LPAL2Q16609 132 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 NELL1Q92832 810 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 CYP26B1Q9NR63 512 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 RXFP3Q9NSD7 469 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 ZSCAN32Q9NX65 697 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 USTQ9Y2C2 406 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 SPTA1P02549 2419 aa13.46□□□□□ -0.25
ATXN3-201ENST00000340660 RAD50Q92878 1312 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 LRP3O75074 770 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 KCNK5O95279 499 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 EOMESO95936 686 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
ATXN3-201ENST00000340660 PLA2G2AP14555 144 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 GMPRP36959 345 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 IL15P40933 162 aaPredicted RBP13.45□□□□□ -0.26
ATXN3-201ENST00000340660 RASGRP4Q8TDF6 673 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 IRF7Q92985 503 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 KCNK12Q9HB15 430 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 SLC38A10Q9HBR0 1119 aa13.45□□□□□ -0.26
ATXN3-201ENST00000340660 CFAP46Q8IYW2 2715 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 RAD21O60216 631 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 ZBED4O75132 1171 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 PPFIA3O75145 1194 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
ATXN3-201ENST00000340660 THPOP40225 353 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 ERVFC1P60507 584 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 CSRP2Q16527 193 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 PHLDB3Q6NSJ2 640 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 CES5AQ6NT32 575 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 FOXQ1Q9C009 403 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 ACAD9Q9H845 621 aa13.44□□□□□ -0.26
ATXN3-201ENST00000340660 LCTP09848 1927 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 MAN1A2O60476 641 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 PRB1P04280 392 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 MTHFRP42898 656 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 ITIH3Q06033 890 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 COL28A1Q2UY09 1125 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 MIGA1Q8NAN2 632 aa13.43□□□□□ -0.26
ATXN3-201ENST00000340660 PRPF38AQ8NAV1 312 aaKnown RBP13.43□□□□□ -0.26
ATXN3-201ENST00000340660 PCMTD1Q96MG8 357 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms