RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 NR3C1P04150 777 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 EPB41P11171 864 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 PEX3P56589 373 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 NLRX1Q86UT6 975 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 BICD1Q96G01 975 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 SMARCAL1Q9NZC9 954 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 PHF20L1A8MW92 1017 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 MOCS3O95396 460 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 NOP2P46087 812 aaKnown RBP11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 ZBED6P86452 979 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 Q4G0T1 1027 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 LRRC55Q6ZSA7 311 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 MXRA8Q9BRK3 442 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 PDCL3Q9H2J4 239 aa11.19□□□□□ -0.62
RBFOX1-202ENST00000340209 SLC16A4O15374 487 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 KNOP1Q1ED39 458 aaKnown RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 WDR59Q6PJI9 974 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 SYT2Q8N9I0 419 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 NAPGQ99747 312 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 CAPN11Q9UMQ6 739 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 MORC2Q9Y6X9 1032 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 RCCD1A6NED2 376 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 NCK2O43639 380 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 EYA4O95677 639 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 MAGEA1P43355 309 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 BACE1P56817 501 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 MCF2L2Q86YR7 1114 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 ADAMTS1Q9UHI8 967 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 ZBTB22O15209 634 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 CALUO43852 315 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 AKAP3O75969 853 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 PTPRAP18433 802 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 KIF11P52732 1056 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 KLHL30Q0D2K2 578 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 UGCGQ16739 394 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 CYFIP1Q7L576 1253 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 CCDC51Q96ER9 411 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 NACC1Q96RE7 527 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 CSADQ9Y600 493 aa11.18□□□□□ -0.62
RBFOX1-202ENST00000340209 ZNF185O15231 689 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 KRT86O43790 486 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 MARK3P27448 753 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 ITGB3BPQ13352 177 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PPP1R16BQ96T49 567 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 AS3MTQ9HBK9 375 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 ZNF536O15090 1300 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 LRRC10BA6NIK2 292 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 VWA5AO00534 786 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PPP1R2P41236 205 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 CNTN2Q02246 1040 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PSMD2Q13200 908 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 MTERF2Q49AM1 385 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PHLPP2Q6ZVD8 1323 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 SAAL1Q96ER3 474 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 TNS1Q9HBL0 1735 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 CYP3A7-CYP3A51PA0A087WV96 503 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 PSMD10O75832 226 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 CYP3A7P24462 503 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 HERVK_113P62684 666 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 KRT83P78385 493 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 REXO2Q9Y3B8 237 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-202ENST00000340209 ITIH6Q6UXX5 1313 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 ATP1A1P05023 1023 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 EXOC3L4Q17RC7 722 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 SWSAP1Q6NVH7 229 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 CEP170P1Q96L14 293 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 RASSF10A6NK89 507 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 NR3C2P08235 984 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 ABCB4P21439 1286 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 PTGER2P43116 358 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 USP14P54578 494 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 TMEM132AQ24JP5 1023 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 ARHGAP20Q9P2F6 1191 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 CGNQ9P2M7 1197 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 FRMD4BQ9Y2L6 1034 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms