RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TRAPPC12Q8WVT3 735 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
UBE3B-201ENST00000340074 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-201ENST00000340074 RRN3P2A6NIE6 340 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 ZNF862O60290 1169 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 HBP1O60381 514 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 IQCF3P0C7M6 154 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 RBL2Q08999 1139 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 ORC2Q13416 577 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-201ENST00000340074 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 TDHQ8IZJ6 230 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 BANK1Q8NDB2 785 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 BBXQ8WY36 941 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-201ENST00000340074 ZBTB10Q96DT7 871 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
UBE3B-201ENST00000340074 MBLAC1A4D2B0 266 aaPredicted RBP17.15■□□□□ 0.34
UBE3B-201ENST00000340074 ACRP10323 421 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 SYT1P21579 422 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 THPOP40225 353 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 PRKCEQ02156 737 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 C9orf50Q5SZB4 431 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 ZNF618Q5T7W0 954 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 LRRC8DQ7L1W4 858 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 C16orf59Q7L2K0 433 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 IL23AQ9NPF7 189 aa17.15■□□□□ 0.34
UBE3B-201ENST00000340074 A0A1W2PPC1 479 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 ZBTB42B2RXF5 422 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 OATP04181 439 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 HSP90AA1P07900 732 aaKnown RBP17.14■□□□□ 0.33
UBE3B-201ENST00000340074 OR52Z1P0C646 297 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 SELPP16109 830 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 SHHQ15465 462 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 ZNF484Q5JVG2 852 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 VWCEQ96DN2 955 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 FAM167AQ96KS9 214 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 COL1A2P08123 1366 aa17.14■□□□□ 0.33
UBE3B-201ENST00000340074 PSMC5P62195 406 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 EPHA7Q15375 998 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 RILPL1Q5EBL4 403 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 HABP4Q5JVS0 413 aaKnown RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 TAF2Q6P1X5 1199 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 TRAF7Q6Q0C0 670 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 RPUSD2Q8IZ73 545 aaKnown RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.333e-6■■■■■ 30.2
UBE3B-201ENST00000340074 NRBP2Q9NSY0 501 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 GBF1Q92538 1859 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 POTEMA6NI47 508 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 STBD1O95210 358 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 KLRC1P26715 233 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 RFC2P35250 354 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 TECP42680 631 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 QARSP47897 775 aaKnown RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 PTGDRQ13258 359 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 GPNMBQ14956 572 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 DNAJB3Q8WWF6 145 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 RGL1Q9NZL6 768 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 WRAP73Q9P2S5 460 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 SEPT9Q9UHD8 586 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-201ENST00000340074 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 PCDHA2Q9Y5H9 948 aa17.13■□□□□ 0.33
UBE3B-201ENST00000340074 MICAL3Q7RTP6 2002 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 RSPH10B2B2RC85 870 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 CAND2O75155 1236 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 CTSHP09668 335 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 RSPH10BP0C881 870 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 BRAPQ7Z569 592 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 DYDC2Q96IM9 177 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 EIF2AK1Q9BQI3 630 aaKnown RBP17.12■□□□□ 0.33
UBE3B-201ENST00000340074 LXNQ9BS40 222 aa17.12■□□□□ 0.33
UBE3B-201ENST00000340074 FAM49AQ9H0Q0 323 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-201ENST00000340074 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 STX6O43752 255 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 NBNO60934 754 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
UBE3B-201ENST00000340074 C22orf31O95567 290 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 CTTNQ14247 550 aaKnown RBP17.11■□□□□ 0.33
UBE3B-201ENST00000340074 XKR3Q5GH77 459 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
UBE3B-201ENST00000340074 RPAINQ86UA6 219 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 RSPH3Q86UC2 560 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
UBE3B-201ENST00000340074 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
UBE3B-201ENST00000340074 NIFKQ9BYG3 293 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms