RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 DNAJC7Q99615 494 aa13.02□□□□□ -0.33
USP1-201ENST00000339950 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.33
USP1-201ENST00000339950 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
USP1-201ENST00000339950 STK17AQ9UEE5 414 aa13.02□□□□□ -0.33
USP1-201ENST00000339950 FAM169AQ9Y6X4 670 aa13.02□□□□□ -0.33
USP1-201ENST00000339950 LAD1O00515 517 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 TTI1O43156 1089 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 CALUO43852 315 aaPredicted RBP13.01□□□□□ -0.33
USP1-201ENST00000339950 SERPING1P05155 500 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 KCNJ1P48048 391 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 MIIPQ5JXC2 388 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 JPH2Q9BR39 696 aaPredicted RBP13.01□□□□□ -0.33
USP1-201ENST00000339950 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 ASIC3Q9UHC3 531 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 PSMD14O00487 310 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 NR3C1P04150 777 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 CATSPER3Q86XQ3 398 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 MDM1Q8TC05 714 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 SAAL1Q96ER3 474 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
USP1-201ENST00000339950 PLCB1Q9NQ66 1216 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 MAP2K7O14733 419 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 EPHB4P54760 987 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 CETN1Q12798 172 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 AADACL2Q6P093 401 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 CCDC121Q6ZUS5 278 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
USP1-201ENST00000339950 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
USP1-201ENST00000339950 ABCB11O95342 1321 aa13□□□□□ -0.33
USP1-201ENST00000339950 BMP3P12645 472 aa13□□□□□ -0.33
USP1-201ENST00000339950 PEX19P40855 299 aa13□□□□□ -0.33
USP1-201ENST00000339950 LRRC14Q15048 493 aa13□□□□□ -0.33
USP1-201ENST00000339950 ICE2Q659A1 982 aa13□□□□□ -0.33
USP1-201ENST00000339950 KAZNQ674X7 775 aa13□□□□□ -0.33
USP1-201ENST00000339950 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
USP1-201ENST00000339950 ZNF507Q8TCN5 953 aa13□□□□□ -0.33
USP1-201ENST00000339950 HEMGNQ9BXL5 484 aa13□□□□□ -0.33
USP1-201ENST00000339950 CUEDC2Q9H467 287 aa13□□□□□ -0.33
USP1-201ENST00000339950 GJA3Q9Y6H8 435 aa13□□□□□ -0.33
USP1-201ENST00000339950 BAZ2AQ9UIF9 1905 aaKnown RBP13□□□□□ -0.33
USP1-201ENST00000339950 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
USP1-201ENST00000339950 IRAK1P51617 712 aa13□□□□□ -0.33
USP1-201ENST00000339950 LRRC63Q05C16 580 aa13□□□□□ -0.33
USP1-201ENST00000339950 GSTA5Q7RTV2 222 aa13□□□□□ -0.33
USP1-201ENST00000339950 MAGOHBQ96A72 148 aaKnown RBP13□□□□□ -0.33
USP1-201ENST00000339950 MTA3Q9BTC8 594 aa13□□□□□ -0.33
USP1-201ENST00000339950 RUSC1Q9BVN2 902 aa13□□□□□ -0.33
USP1-201ENST00000339950 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
USP1-201ENST00000339950 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
USP1-201ENST00000339950 MRC1P22897 1456 aa13□□□□□ -0.33
USP1-201ENST00000339950 MYH10P35580 1976 aa13□□□□□ -0.33
USP1-201ENST00000339950 RPSAP08865 295 aaKnown RBP13□□□□□ -0.33
USP1-201ENST00000339950 NR1D1P20393 614 aa13□□□□□ -0.33
USP1-201ENST00000339950 ZNF577Q9BSK1 485 aa13□□□□□ -0.33
USP1-201ENST00000339950 TLR10Q9BXR5 811 aa13□□□□□ -0.33
USP1-201ENST00000339950 LRRC4BQ9NT99 713 aa13□□□□□ -0.33
USP1-201ENST00000339950 NDUFB10O96000 172 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 ACTN3Q08043 901 aaPredicted RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 MICALCLQ6ZW33 695 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 EEPD1Q7L9B9 569 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 PASD1Q8IV76 773 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 ELOA2Q8IYF1 753 aaPredicted RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 SLC30A5Q8TAD4 765 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 SCFD1Q8WVM8 642 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 TACO1Q9BSH4 297 aaKnown RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 ACSL3O95573 720 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 UCHL3P15374 230 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 CYP11B2P19099 503 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 DRAP1Q14919 205 aaPredicted RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 CREG2Q8IUH2 290 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 TBC1D31Q96DN5 1066 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 QTRT2Q9H974 415 aaKnown RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 SLIT3O75094 1523 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 LRRC10BA6NIK2 292 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 IFNB1P01574 187 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 TNIP1Q15025 636 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 IFI16Q16666 785 aaKnown RBP12.99□□□□□ -0.33
USP1-201ENST00000339950 ZNF394Q53GI3 561 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 FBXL5Q9UKA1 691 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
USP1-201ENST00000339950 SPATA31A5Q5VU36 1347 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms