RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 C9orf84Q5VXU9 1444 aa13.74□□□□□ -0.21
USP47-202ENST00000339865 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 F8W8V4 182 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 H0YIN7 160 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 SNAP25P60880 206 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 GID8Q9NWU2 228 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 UTP6Q9NYH9 597 aaKnown RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 KLF15Q9UIH9 416 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 ASAP2O43150 1006 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 NDUFA8P51970 172 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 POU5F1BQ06416 359 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 LZTS2Q9BRK4 669 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 PAPOLBQ9NRJ5 636 aaKnown RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 PHLPP2Q6ZVD8 1323 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 KRT40Q6A162 431 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 ARMCX6Q7L4S7 300 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 ULK4Q96C45 1275 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 CNBD2Q96M20 576 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 DDX25Q9UHL0 483 aaKnown RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 CFTRP13569 1480 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 GOLGA8MH3BSY2 632 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 MRPS25P82663 173 aaKnown RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 KLC4Q9NSK0 619 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 SEPT3Q9UH03 358 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 PTPN21Q16825 1174 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 IYDQ6PHW0 289 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 AGR3Q8TD06 166 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 ZMYND8Q9ULU4 1186 aaPredicted RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 PYCARDQ9ULZ3 195 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 PRAMEP78395 509 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
USP47-202ENST00000339865 KRT72Q14CN4 511 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 DCDC2Q9UHG0 476 aa13.73□□□□□ -0.21
USP47-202ENST00000339865 KLC1Q07866 573 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 ST13P5Q8NFI4 369 aaPredicted RBP13.72□□□□□ -0.21
USP47-202ENST00000339865 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 ETNK1Q9HBU6 452 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 BPIFB4P59827 614 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 LRRC74AQ0VAA2 488 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 UBXN8O00124 270 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 BAG6P46379 1132 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 MFAP3P55082 362 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 RBL2Q08999 1139 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 CDO1Q16878 200 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 CDH24Q86UP0 819 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 NARS2Q96I59 477 aaKnown RBP13.72□□□□□ -0.21
USP47-202ENST00000339865 ANKRD36BP1Q96IX9 119 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 VPS39Q96JC1 886 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 SPATA2Q9UM82 520 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 LINC00854A0A1B0GVQ3 168 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 SERPINB3P29508 390 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
USP47-202ENST00000339865 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
USP47-202ENST00000339865 ZBED1O96006 694 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 RPS6P62753 249 aaKnown RBP13.72□□□□□ -0.21
USP47-202ENST00000339865 SPATA1Q5VX52 437 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 BRD1O95696 1058 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 IGBP1P78318 339 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 MDH1BQ5I0G3 518 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 RCSD1Q6JBY9 416 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 OLFML3Q9NRN5 406 aa13.72□□□□□ -0.21
USP47-202ENST00000339865 MAGOHP61326 146 aaKnown RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 AOC3Q16853 763 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 KLHL25Q9H0H3 589 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 SLFN12Q8IYM2 578 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 CATSPER1Q8NEC5 780 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 FRMPD2Q68DX3 1309 aaPredicted RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 CYLC2Q14093 348 aaPredicted RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 RBBP7Q16576 425 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 NLRP4Q96MN2 994 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 KDM4CQ9H3R0 1056 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 CASS4Q9NQ75 786 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 GCNT4Q9P109 453 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 NCAPD3P42695 1498 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 M0R3G1 203 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 PNMA6AP0CW24 399 aaPredicted RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 TRIP4Q15650 581 aaPredicted RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 TRIM11Q96F44 468 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 PRPF18Q99633 342 aaKnown RBP13.71□□□□□ -0.21
USP47-202ENST00000339865 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
USP47-202ENST00000339865 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms