RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CLK2P49760 499 aaKnown RBP11.92□□□□□ -0.5
RTN3-201ENST00000338850 ASIC1P78348 528 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 IRX3P78415 501 aaPredicted RBP11.92□□□□□ -0.5
RTN3-201ENST00000338850 TBC1D8BQ0IIM8 1120 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 HABP4Q5JVS0 413 aaKnown RBP11.92□□□□□ -0.5
RTN3-201ENST00000338850 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 MMGT1Q8N4V1 131 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 KIAA0895Q8NCT3 520 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 LRRC15Q8TF66 581 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
RTN3-201ENST00000338850 LARP4BQ92615 738 aaKnown RBP11.92□□□□□ -0.5
RTN3-201ENST00000338850 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 CEP63Q96MT8 703 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 PNKPQ96T60 521 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 EHD4Q9H223 541 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 ST7Q9NRC1 585 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 BLOC1S4Q9NUP1 217 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 TMOD4Q9NZQ9 345 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 RNF14Q9UBS8 474 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 STK24Q9Y6E0 443 aa11.92□□□□□ -0.5
RTN3-201ENST00000338850 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 GH2P01242 217 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 PDHBP11177 359 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 CDC25AP30304 524 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 ADCY7P51828 1080 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 GRB10Q13322 594 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 CASP8Q14790 479 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 GPATCH4Q5T3I0 446 aaKnown RBP11.91□□□□□ -0.5
RTN3-201ENST00000338850 ANKRD40Q6AI12 368 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 CCDC70Q6NSX1 233 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 KIAA1328Q86T90 577 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 RNF10Q8N5U6 811 aaKnown RBP11.91□□□□□ -0.5
RTN3-201ENST00000338850 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 TBCKQ8TEA7 893 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 RAD54LQ92698 747 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 P2RX7Q99572 595 aaKnown RBP11.91□□□□□ -0.5
RTN3-201ENST00000338850 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
RTN3-201ENST00000338850 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
RTN3-201ENST00000338850 ABCB6Q9NP58 842 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 CWC15Q9P013 229 aaKnown RBP11.91□□□□□ -0.5
RTN3-201ENST00000338850 SERPINB13Q9UIV8 391 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 GJD2Q9UKL4 321 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 JRKLQ9Y4A0 524 aa11.91□□□□□ -0.5
RTN3-201ENST00000338850 A0A0U1RQJ8 604 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 PP2D1A8MPX8 630 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 B4DLN1 442 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 H0YGN5 161 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 PEX10O60683 326 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 TACC1O75410 805 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 SGPL1O95470 568 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 IVLP07476 585 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 TCP1P17987 556 aaKnown RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 ANXA13P27216 316 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 MTIF2P46199 727 aaKnown RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 VSNL1P62760 191 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 KIF5AQ12840 1032 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 STK4Q13043 487 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 SPA17Q15506 151 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 CALCRLQ16602 461 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 ZCWPW2Q504Y3 356 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 LRRC55Q6ZSA7 311 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 SECISBP2LQ93073 1101 aaKnown RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 CEP95Q96GE4 821 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 MBOAT7Q96N66 472 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 PNMA5Q96PV4 448 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 TSG101Q99816 390 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 TXNRD2Q9NNW7 524 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 LUC7LQ9NQ29 371 aaKnown RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 PAK6Q9NQU5 681 aaPredicted RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
RTN3-201ENST00000338850 PUF60Q9UHX1 559 aaKnown RBP11.9□□□□□ -0.5
RTN3-201ENST00000338850 PNMA6FA0A0J9YX94 578 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 H3BQF6 201 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 TULP2O00295 520 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 FARP2O94887 1054 aaPredicted RBP11.89□□□□□ -0.51
RTN3-201ENST00000338850 SHMT1P34896 483 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 SLC20A2Q08357 652 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 KRT79Q5XKE5 535 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 C12orf42Q96LP6 360 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 DEFB118Q96PH6 123 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 ALS2CR12Q96Q35 445 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 RBPJLQ9UBG7 517 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 LRWD1Q9UFC0 647 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 ADAM21Q9UKJ8 722 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms