RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 FKBP1BP68106 108 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 TBC1D8BQ0IIM8 1120 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 STXBP2Q15833 593 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 NFIL3Q16649 462 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 VWA3BQ502W6 1294 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 ANKRD35Q8N283 1001 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 GLIS3Q8NEA6 775 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 OPTNQ96CV9 577 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 MOV10L1Q9BXT6 1211 aaKnown RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 ASCC2Q9H1I8 757 aaPredicted RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 MRPL44Q9H9J2 332 aaKnown RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 WRAP73Q9P2S5 460 aaPredicted RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 DDX39AO00148 427 aaKnown RBP17.96■□□□□ 0.47
HPS1-202ENST00000338546 TRAF5O00463 557 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 ATP9AO75110 1047 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 RAD51AP2Q09MP3 1159 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 MIIPQ5JXC2 388 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
HPS1-202ENST00000338546 BANK1Q8NDB2 785 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 PRIMPOLQ96LW4 560 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 TBC1D7Q9P0N9 293 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 SAMM50Q9Y512 469 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 PCDHA10Q9Y5I2 948 aa17.96■□□□□ 0.47
HPS1-202ENST00000338546 GOLGA6L9A6NEM1 432 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 CETN3O15182 167 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 KCNA2P16389 499 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 RPL13P26373 211 aaKnown RBP17.96■□□□□ 0.46
HPS1-202ENST00000338546 CASP14P31944 242 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 SNAPC2Q13487 334 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 MOGSQ13724 837 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 ALCAMQ13740 583 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 PTPN21Q16825 1174 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 NYAP1Q6ZVC0 841 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 TMTC1Q8IUR5 882 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 MYCT1Q8N699 235 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.46
HPS1-202ENST00000338546 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.46
HPS1-202ENST00000338546 FGFBP2Q9BYJ0 223 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 NDST4Q9H3R1 872 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 TYW1Q9NV66 732 aaKnown RBP17.96■□□□□ 0.46
HPS1-202ENST00000338546 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 FAM184BQ9ULE4 1060 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 CAPN11Q9UMQ6 739 aa17.96■□□□□ 0.46
HPS1-202ENST00000338546 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 A0A1W2PQJ5 194 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 PPP2R3AQ06190 1150 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
HPS1-202ENST00000338546 PADI6Q6TGC4 694 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 SLC17A8Q8NDX2 589 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 SLC45A1Q9Y2W3 748 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 PCDHB13Q9Y5F0 798 aa17.95■□□□□ 0.46
HPS1-202ENST00000338546 RSPH10B2B2RC85 870 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 CNMDO75829 334 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 RGS20O76081 388 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 CCNE2O96020 404 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 RSPH10BP0C881 870 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 EDNRBP24530 442 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 YWHABP31946 246 aaKnown RBP17.94■□□□□ 0.46
HPS1-202ENST00000338546 RARRES1P49788 294 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 ADAM9Q13443 819 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 PTPN14Q15678 1187 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 CEP135Q66GS9 1140 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 MOB2Q70IA6 237 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 ZNF720Q7Z2F6 126 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 FRMD5Q7Z6J6 570 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 ATP6V0A1Q93050 837 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 EDEM3Q9BZQ6 932 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
HPS1-202ENST00000338546 LCTP09848 1927 aa17.94■□□□□ 0.46
HPS1-202ENST00000338546 POTEB2H3BUK9 544 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 PES1O00541 588 aaKnown RBP17.93■□□□□ 0.46
HPS1-202ENST00000338546 ZBTB39O15060 712 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 GCNT3O95395 438 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 PSAPP07602 524 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 FXR1P51114 621 aaKnown RBP eCLIP17.93■□□□□ 0.46
HPS1-202ENST00000338546 ALDH5A1P51649 535 aaPredicted RBP17.93■□□□□ 0.46
HPS1-202ENST00000338546 CASP5P51878 434 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 GPAT2Q6NUI2 795 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 OTUD6AQ7L8S5 288 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 NELFCDQ8IXH7 590 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 SHCBP1Q8NEM2 672 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 OR8K1Q8NGG5 319 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 GOLGA5Q8TBA6 731 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 MROH8Q9H579 483 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 JPH1Q9HDC5 661 aaPredicted RBP17.93■□□□□ 0.46
HPS1-202ENST00000338546 ABHD10Q9NUJ1 306 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 LARSQ9P2J5 1176 aaKnown RBP17.93■□□□□ 0.46
HPS1-202ENST00000338546 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
HPS1-202ENST00000338546 KIAA1217Q5T5P2 1943 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 SLC16A3O15427 465 aaKnown RBP17.92■□□□□ 0.46
HPS1-202ENST00000338546 MYBP10242 640 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 TNNT1P13805 278 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 HOXD13P35453 343 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 MYBPC2Q14324 1141 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms