RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MYL1P05976 194 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 PHLDB2Q86SQ0 1253 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 DTNBP1Q96EV8 351 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 CCDC17Q96LX7 622 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 AZI2Q9H6S1 392 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 RNF14Q9UBS8 474 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 STK17AQ9UEE5 414 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 CIB2O75838 187 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 COL9A3Q14050 684 aaPredicted RBP17.33■□□□□ 0.37
NPHP3-201ENST00000337331 LLGL1Q15334 1064 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 ANKRD20A3Q5VUR7 823 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 MRPL11Q9Y3B7 192 aaKnown RBP17.33■□□□□ 0.37
NPHP3-201ENST00000337331 MFSD4BQ5TF39 518 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 CAPN12Q6ZSI9 719 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 MB21D2Q8IYB1 491 aaPredicted RBP17.33■□□□□ 0.37
NPHP3-201ENST00000337331 TEX9Q8N6V9 391 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 AGAP11Q8TF27 550 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 XPO6Q96QU8 1125 aaKnown RBP17.33■□□□□ 0.37
NPHP3-201ENST00000337331 TXLNGQ9NUQ3 528 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 PPP1R9AQ9ULJ8 1098 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 SSX2IPQ9Y2D8 614 aa17.33■□□□□ 0.37
NPHP3-201ENST00000337331 BZW2Q9Y6E2 419 aaKnown RBP17.33■□□□□ 0.37
NPHP3-201ENST00000337331 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 MECOMQ03112 1051 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 MESDQ14696 234 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 PNMA2Q9UL42 364 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 PAIP2BQ9ULR5 123 aaKnown RBP17.33■□□□□ 0.36
NPHP3-201ENST00000337331 ABCA6Q8N139 1617 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 TRIM49BA6NDI0 452 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 TBX2Q13207 712 aaPredicted RBP17.33■□□□□ 0.36
NPHP3-201ENST00000337331 PPP2R5DQ14738 602 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 CCDC89Q8N998 374 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 DEPTORQ8TB45 409 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 MORC4Q8TE76 937 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 EZH1Q92800 747 aaPredicted RBP17.33■□□□□ 0.36
NPHP3-201ENST00000337331 NDST4Q9H3R1 872 aa17.33■□□□□ 0.36
NPHP3-201ENST00000337331 CEP152O94986 1710 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 PABPN1LA6NDY0 278 aaKnown RBP17.32■□□□□ 0.36
NPHP3-201ENST00000337331 ARL6IP4Q66PJ3 421 aaKnown RBP17.32■□□□□ 0.36
NPHP3-201ENST00000337331 SDCCAG8Q86SQ7 713 aaPredicted RBP17.32■□□□□ 0.36
NPHP3-201ENST00000337331 CFAP61Q8NHU2 1237 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 RMI1Q9H9A7 625 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 C1orf112Q9NSG2 853 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 STOML1Q9UBI4 398 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 TCP10L2B9ZVM9 353 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 CLIC2O15247 247 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 UBXN2AP68543 259 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 MMGT1Q8N4V1 131 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 FAM133AQ8N9E0 248 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 OXER1Q8TDS5 423 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 FMO2Q99518 471 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.32■□□□□ 0.36
NPHP3-201ENST00000337331 TTLL1O95922 423 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 ATP4AP20648 1035 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 POLD1P28340 1107 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 ARMCX6Q7L4S7 300 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 DDX42Q86XP3 938 aaKnown RBP eCLIP17.32■□□□□ 0.36
NPHP3-201ENST00000337331 GLG1Q92896 1179 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 LACRTQ9GZZ8 138 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 NEDD4P46934 1319 aa17.32■□□□□ 0.36
NPHP3-201ENST00000337331 MEIS1O00470 390 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 AHCYL1O43865 530 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 PYGLP06737 847 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 ATF7P17544 494 aaPredicted RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 ITIH3Q06033 890 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CUL4BQ13620 913 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CASC4Q6P4E1 433 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 DDX47Q9H0S4 455 aaKnown RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 ADAMTS1Q9UHI8 967 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 C2CD2Q9Y426 696 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 MAP3K7O43318 606 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 SHOX2O60902 331 aaPredicted RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 LRRN2O75325 713 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 NQO1P15559 274 aaKnown RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CHN1P15882 459 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 ROR2Q01974 943 aaKnown RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 TMTC3Q6ZXV5 915 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 DNAJC9Q8WXX5 260 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 PRCCQ92733 491 aaPredicted RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 FDPSP14324 419 aaKnown RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CCDC62Q6P9F0 684 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 FAM186BQ8IYM0 893 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CCDC110Q8TBZ0 833 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 PRMT1Q99873 361 aaKnown RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 THAP9Q9H5L6 903 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 ZSCAN5CA6NGD5 496 aaPredicted RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 FANCGO15287 622 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 ERFP50548 548 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CUL1Q13616 776 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 SCARF1Q14162 830 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 OLFML2BQ68BL8 750 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 TMEM139Q8IV31 216 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 PDCD7Q8N8D1 485 aaKnown RBP17.31■□□□□ 0.36
NPHP3-201ENST00000337331 CENPKQ9BS16 269 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms