RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 MTMR9Q96QG7 549 aa17.76■□□□□ 0.43
MRPL55-202ENST00000336300 CTAGE1Q96RT6 745 aa17.76■□□□□ 0.43
MRPL55-202ENST00000336300 PRO3102Q9H379 93 aa17.76■□□□□ 0.43
MRPL55-202ENST00000336300 IL23AQ9NPF7 189 aa17.76■□□□□ 0.43
MRPL55-202ENST00000336300 COL1A2P08123 1366 aa17.76■□□□□ 0.43
MRPL55-202ENST00000336300 IGSF9BQ9UPX0 1349 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 LAD1O00515 517 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 OATP04181 439 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 OR52Z1P0C646 297 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 SYT1P21579 422 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 QARSP47897 775 aaKnown RBP17.75■□□□□ 0.43
MRPL55-202ENST00000336300 XKR3Q5GH77 459 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 LRRC8DQ7L1W4 858 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 SCLYQ96I15 445 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 WNT8AQ9H1J5 351 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 MTIF3Q9H2K0 278 aaKnown RBP17.75■□□□□ 0.43
MRPL55-202ENST00000336300 PCDH10Q9P2E7 1040 aa17.75■□□□□ 0.43
MRPL55-202ENST00000336300 KAT6AQ92794 2004 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 MBLAC1A4D2B0 266 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-202ENST00000336300 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 WNT7AO00755 349 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 ATP4AP20648 1035 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 PRKCEQ02156 737 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 MTHFD1LQ6UB35 978 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 BANK1Q8NDB2 785 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 ERMNQ8TAM6 284 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
MRPL55-202ENST00000336300 RAB34Q9BZG1 259 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 FTOQ9C0B1 505 aaKnown RBP eCLIP17.74■□□□□ 0.43
MRPL55-202ENST00000336300 PCDHA2Q9Y5H9 948 aa17.74■□□□□ 0.43
MRPL55-202ENST00000336300 M0QZ92 97 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 EML1O00423 815 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 MAGEB2O15479 319 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 FGBP02675 491 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 ACTN1P12814 892 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 KLRC1P26715 233 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 TECP42680 631 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-202ENST00000336300 BECN1Q14457 450 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 MARCH8Q5T0T0 291 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 ZNF618Q5T7W0 954 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 OTUD6AQ7L8S5 288 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 DEFB128Q7Z7B8 93 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 RPAINQ86UA6 219 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 NME8Q8N427 588 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 NEK9Q8TD19 979 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 ZSWIM4Q9H7M6 989 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 PCDHB6Q9Y5E3 794 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 STK24Q9Y6E0 443 aa17.73■□□□□ 0.43
MRPL55-202ENST00000336300 SMIM35A0A1B0GVV1 85 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 STX6O43752 255 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 ZNF862O60290 1169 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 ACRP10323 421 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 TMOD1P28289 359 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 PTGDRQ13258 359 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 NBR1Q14596 966 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 TRIM71Q2Q1W2 868 aaKnown RBP17.72■□□□□ 0.43
MRPL55-202ENST00000336300 HABP4Q5JVS0 413 aaKnown RBP17.72■□□□□ 0.43
MRPL55-202ENST00000336300 IER5Q5VY09 327 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 EXOC8Q8IYI6 725 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 TRAPPC12Q8WVT3 735 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 DNAJB3Q8WWF6 145 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
MRPL55-202ENST00000336300 SEPT9Q9UHD8 586 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-202ENST00000336300 LTBP2Q14767 1821 aa17.72■□□□□ 0.43
MRPL55-202ENST00000336300 BMP15O95972 392 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 TBC1D8BQ0IIM8 1120 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 SHHQ15465 462 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 UGCGQ16739 394 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 TMEM240Q5SV17 173 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 RUFY4Q6ZNE9 571 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 ZNF365Q70YC5 407 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 C4orf19Q8IY42 314 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 METTL13Q8N6R0 699 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 WNT8BQ93098 351 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 EIF2AK1Q9BQI3 630 aaKnown RBP17.71■□□□□ 0.43
MRPL55-202ENST00000336300 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.431e-7■■■■□ 24.9
MRPL55-202ENST00000336300 LXNQ9BS40 222 aa17.71■□□□□ 0.43
MRPL55-202ENST00000336300 NIFKQ9BYG3 293 aaKnown RBP17.71■□□□□ 0.43
MRPL55-202ENST00000336300 FAM49AQ9H0Q0 323 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-202ENST00000336300 ZSCAN16Q9H4T2 348 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-202ENST00000336300 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.71■□□□□ 0.43
MRPL55-202ENST00000336300 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
MRPL55-202ENST00000336300 CTSHP09668 335 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 PRPHP41219 470 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 EPHB4P54760 987 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 PDIA5Q14554 519 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 JPH2Q9BR39 696 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-202ENST00000336300 RGL1Q9NZL6 768 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 PPME1Q9Y570 386 aa17.7■□□□□ 0.42
MRPL55-202ENST00000336300 RANBP2P49792 3224 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms