RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ADAM9Q13443 819 aa21.79■■□□□ 1.08
CDCA4-201ENST00000336219 QRICH1Q2TAL8 776 aa21.79■■□□□ 1.08
CDCA4-201ENST00000336219 WHAMMQ8TF30 809 aa21.79■■□□□ 1.08
CDCA4-201ENST00000336219 ANO3Q9BYT9 981 aa21.79■■□□□ 1.08
CDCA4-201ENST00000336219 GLT8D2Q9H1C3 349 aa21.79■■□□□ 1.08
CDCA4-201ENST00000336219 GANQ9H2C0 597 aa21.79■■□□□ 1.08
CDCA4-201ENST00000336219 KIF13BQ9NQT8 1826 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 FAM170AA1A519 330 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 FLT3P36888 993 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 SLC12A3P55017 1021 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 EDRF1Q3B7T1 1238 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 ARSHQ5FYA8 562 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 NCAPGQ9BPX3 1015 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 TMBIM4Q9HC24 238 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 USP21Q9UK80 565 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 CYP3A7-CYP3A51PA0A087WV96 503 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 A6NNZ2 444 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 FSBPO95073 299 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 HLA-DOAP06340 250 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 MYBP10242 640 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 CYP3A7P24462 503 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 TMOD1P28289 359 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 HSPA9P38646 679 aaKnown RBP21.78■■□□□ 1.08
CDCA4-201ENST00000336219 STAT3P40763 770 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 TUBB8Q3ZCM7 444 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 CDC42EP5Q6NZY7 148 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 MBOAT7Q96N66 472 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 MXD3Q9BW11 206 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 TAF1DQ9H5J8 278 aaPredicted RBP21.78■■□□□ 1.08
CDCA4-201ENST00000336219 BCCIPQ9P287 314 aaKnown RBP eCLIP21.78■■□□□ 1.08
CDCA4-201ENST00000336219 PCDHA1Q9Y5I3 950 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 PITPNM2Q9BZ72 1349 aa21.78■■□□□ 1.08
CDCA4-201ENST00000336219 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
CDCA4-201ENST00000336219 CEP104O60308 925 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 SLURP2P0DP57 97 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 SCNN1DP51172 638 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 DDR1Q08345 913 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 KCNH2Q12809 1159 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 ASIC2Q16515 512 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 POTEFA5A3E0 1075 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 KRT18P05783 430 aaKnown RBP21.77■■□□□ 1.08
CDCA4-201ENST00000336219 POTEIP0CG38 1075 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 EPS15P42566 896 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 TNNC1P63316 161 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 PTK2Q05397 1052 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 RPS6KA1Q15418 735 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 POTEGQ6S5H5 508 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 POTEEQ6S8J3 1075 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 SLFN12Q8IYM2 578 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 DHX36Q9H2U1 1008 aaKnown RBP21.77■■□□□ 1.08
CDCA4-201ENST00000336219 LRRC4CQ9HCJ2 640 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 CD248Q9HCU0 757 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 TMEM59LQ9UK28 342 aa21.77■■□□□ 1.08
CDCA4-201ENST00000336219 KLRG2A4D1S0 409 aaPredicted RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 HMGB1P1B2RPK0 211 aaPredicted RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 CETN3O15182 167 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 TAF4BQ92750 862 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 DDX47Q9H0S4 455 aaKnown RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 ZHX3Q9H4I2 956 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 GEMIN8Q9NWZ8 242 aaKnown RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 ATXN2Q99700 1313 aaKnown RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 NR2F2P24468 414 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 SPRED3Q2MJR0 410 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 EMC10Q5UCC4 262 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 ZNF571Q7Z3V5 609 aaPredicted RBP21.76■■□□□ 1.07
CDCA4-201ENST00000336219 CABS1Q96KC9 395 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 ISCUQ9H1K1 167 aa21.76■■□□□ 1.07
CDCA4-201ENST00000336219 H0YGN5 161 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 SLC9A1P19634 815 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 CASP5P51878 434 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 SPIRE1Q08AE8 756 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 NFIAQ12857 509 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 QPCTQ16769 361 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 MOXD1Q6UVY6 613 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 CCDC17Q96LX7 622 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 NFS1Q9Y697 457 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 TOM1O60784 492 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 KIF4AO95239 1232 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 FAM107AO95990 144 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 ZNF844Q08AG5 666 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 APOBEC3HQ6NTF7 200 aaKnown RBP21.75■■□□□ 1.07
CDCA4-201ENST00000336219 CATSPER3Q86XQ3 398 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 CRYGNQ8WXF5 182 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 CYFIP2Q96F07 1278 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 PLCB1Q9NQ66 1216 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 SIPA1L1O43166 1804 aa21.75■■□□□ 1.07
CDCA4-201ENST00000336219 DCDC2CA8MYV0 355 aa21.74■■□□□ 1.07
CDCA4-201ENST00000336219 MEIS2O14770 477 aa21.74■■□□□ 1.07
CDCA4-201ENST00000336219 ITGA4P13612 1032 aa21.74■■□□□ 1.07
CDCA4-201ENST00000336219 ETNPPLQ8TBG4 499 aa21.74■■□□□ 1.07
CDCA4-201ENST00000336219 MYCBPQ99417 103 aaPredicted RBP21.74■■□□□ 1.07
CDCA4-201ENST00000336219 JPH2Q9BR39 696 aaPredicted RBP21.74■■□□□ 1.07
CDCA4-201ENST00000336219 ZC3H12CQ9C0D7 883 aaKnown RBP21.74■■□□□ 1.07
CDCA4-201ENST00000336219 DNAJC18Q9H819 358 aa21.74■■□□□ 1.07
CDCA4-201ENST00000336219 CNOT8Q9UFF9 292 aaKnown RBP21.74■■□□□ 1.07
CDCA4-201ENST00000336219 HDAC9Q9UKV0 1011 aa21.74■■□□□ 1.07
CDCA4-201ENST00000336219 GOLGA6L10A6NI86 522 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms